GEO Accession viewer

GSE62410	Transcriptome profiling of Normal and Cancerous Prostate Cells
GSE62818	Transcriptome profiling of Normal and Cancerous Prostate Cells [RNA-Seq]
GSE63015	Self-organization of polarized cerebellar plate neuroepithelium in three-dimensional culture of human pluripotent stem cells
GSE63744	Large-scale profiling of intracellular signalling pathway activation reveals major distinctions between airway smooth muscle cells of asthmatics and non-asthmatics.
GSE63782	Transcriptional plasticity promotes primary and acquired resistance to BET bromodomain inhibition
GSE64233	Acute TNF-induced repression of cell identity genes is mediated by NFkB-directed redistribution of cofactors from super-enhancers
GSE64332	Human DIS3 shapes the RNA polymerase II transcriptome degrading variety of unwanted transcripts.
GSE64590	Estrogen Receptor Beta Impacts Hormone-Induced Alternative mRNA Splicing in Breast Cancer Cells
GSE64744	Small RNA profiling reveals deregulated PTEN/PI3K/Akt pathway in asthmatic bronchial smooth muscle cells
GSE64752	Long-term expandable SOX9+ chondrogenic ectomesenchymal cells from human pluripotent stem cells
GSE64882	Conversion of Human Fibroblasts to Stably Self-Renewing Neural Stem Cells with a Single Zinc-Finger Transcription Factor
GSE66594	Epigenomic landscapes of human inflammation associated macrophages [ChIP-seq]
GSE66595	Epigenomic landscapes of human inflammation associated macrophages
GSE67128	Comparative whole-transcriptomic analysis between normal and AKAP-Lbc-depleted human embryonic stem cells
GSE68005	Comparison of gene expression profiles between FRA1 knockdown and vector control Bel-7402 cells by RNA-sequencing
GSE68230	Small molecule inhibition of ERK dimerization prevents tumorigenesis by Ras-ERK pathway oncogenes
GSE69206	Comparing effects of perfusion and hydrostatic pressure on human chondrocytes using gene profiles
GSE69377	Histone H3 Lysine4 Acetylation-Methylation Dynamics Define Breast Cancer Subtypes [ChIP-seq]
GSE69777	Cistrome of the Aldosterone-activated Mineralocorticoid Receptor in Human Renal Cells
GSE71862	Differential Gene Expression between MCF10A and MCF7 cells
GSE71993	Differential gene expression profiling of MIHA cells transfected with C-terminal truncated HBx mutants
GSE72360	Mapping of 5-hydroxymethylcytosine by selective chemical labeling (SCL-seq) in human naive B cells and in vitro differentiated plasmablasts (P1 cells) [HTS]
GSE72498	Cell cycle-dependent reconfiguration of the DNA (hydroxy) methylome during terminal differentiation of human B cells into plasma cells
GSE75168	Histone H3 lysine 4 acetylation-methylation dynamics define breast cancer subtypes [RNA-seq]
GSE75169	Histone H3 Lysine4 Acetylation-Methylation Dynamics Define Breast Cancer Subtypes
GSE75792	TT-Seq captures the human transient transcriptome
GSE75823	Sequencing Universal Human Reference RNA by Smart-seq and early barcoding library preparation methods
GSE76129	ZNF599 and DNMT3A coordinately control nuclear envelope organization by repression of SUN4 expression
GSE76445	Trascriptome of thyroid cancer-induced macrophages
GSE76608	Expression profiling of MCF-7 cells with 10nM treatment of TCDD
GSE77772	Bivalency - Histone H3 Lysine4 and Histone H3 Lysine27 Methylation Dynamics
GSE77938	Transcriptome profiling of human keratoconus corneas through RNA sequencing identifies collagen synthesis disruption and downregulation of core elements of TGF-β, Hippo, and Wnt pathways
GSE78002	Multivalent binding of PWWP2A to H2A.Z-marked transcriptional active chromatin regulates mitosis and organ development [ChIP-seq]
GSE78003	Multivalent binding of PWWP2A to H2A.Z-marked transcriptional active chromatin regulates mitosis and organ development [RNA-seq]
GSE78009	Multivalent binding of PWWP2A to H2A.Z-marked transcriptional active chromatin regulates mitosis and organ development
GSE78067	Pathogenicity of genomic duplications is determined by formation of novel chromatin domains (neo-TADs) (4C-seq)
GSE78109	Pathogenicity of genomic duplications is determined by formation of novel chromatin domains (neo-TADs)
GSE79395	Knockdown of ADNP in HCT116 colon cancer cells
GSE79572	Candidate genes and pathways downstream of PAX8 involved in ovarian high-grade serous carcinoma
GSE79988	The myelin protein PMP2 is regulated by SOX10 and drives melanoma cell invasion
GSE80338	Human glioblastoma-associated microglia/monocytes express a distinct RNA profile compared to human control and murine samples
GSE83142	Identification of rare, dormant and therapy resistant stem cells in acute lymphoblastic leukemia
GSE84073	Patient-derived organoid cultures model human primary liver cancer in vitro
GSE84135	The NFkB subunit RELA is a master transcriptional regulator of the committed epithelial-mesenchymal transition in airway epithelial cells
GSE84897	Genome-wide analysis of DNA hydroxymethylation and methylation during epstein-barr virus infection.
GSE85012	Genome-wide profiling of DNA methylation patterns in iAs-transformed cells
GSE85201	TT-seq captures simultaneous activation of eRNAs and promoters during T cell activation
GSE85461	Model systems of DUX4 expression recapitulate the transcriptional profile of FSHD cells
GSE85857	Runx1 stabilizes the mammary epithelial cell phenotype and prevents epithelial to mesenchymal transition
GSE86021	Crenolanib in combination with azacitidine abrogates stromal protection and survival of leukemia-initiating cells in FLT3-ITD+ AML
GSE86602	Comparison of gene expression profiles between SCD1 knockdown and vector control of Huh7 cells and PLC/PRF/5 cells by RNA-sequencing
GSE89157	Targeting a phospho-STAT3-miRNAs pathway improves vesicular hepatic steatosis in an in vitro model
GSE89187	Transcriptome analysis of peripheral blood monocytes
GSE89838	Hypoxic regulation of transcription in HUVEC is mediated by EPAS1
GSE89841	Transcriptional repression in hypoxia is mediated by the Sin3A histone deacetylase complex
GSE89917	Targeting the androgen receptor N-terminus via the cochaperone Bag-1L [RNA-Seq KO]
GSE89939	Targeting the androgen receptor N-terminus via the cochaperone Bag-1L
GSE90523	The long non-coding RNA GAS5 differentially regulates cell cycle arrest and apoptosis in human neuroblastoma
GSE91000	Cystathionine-β-Synthase Promotes Colon Carcinogenesis
GSE92262	mRNA expression levels in splenic human mononuclear cells of mock- and HIV-1-infected humanized mice
GSE92456	Transcriptome analysis of dominant-negative Brd4 mutants identifies Brd4-specific target genes of BET inhibitor JQ1
GSE92852	Generation and functional characterization of MDSC-like cells
GSE93385	Differential responses of human fetal brain neural stem cells to Zika virus infection
GSE94613	Promoter-bound METTL3 maintains myeloid leukemia by m6A-dependent regulation of protein translation
GSE94730	The RNA helicase DDX39B regulates IL7R alternative splicing reducing the risk of Multiple Sclerosis
GSE94744	Microglia and the immune response to a human temporal lobe seizure
GSE94950	Poly(A)-ClickSeq resolves CF25-mediated alternative poly-adenylation, HeLa
GSE95505	Lineage specific differentiation is influenced by state of human pluripotency
GSE95561	Lineage specific differentiation is influenced by state of human pluripotency [RNA-seq]
GSE95860	Expression data from fresh human embryonic lung epithelial tip and stalk cells and cultured organoids derived from tip and stalk.
GSE96056	CDK9-dependent RNA polymerase II pausing controls transcription initiation
GSE96713	Time-dependent regulation of cellular programming of monocytes by NCOR2 [RNASeq_KD]
GSE96715	Time-dependent regulation of cellular programming of monocytes by NCOR2 [RNASeq_TK]
GSE96719	Time-dependent regulation of cellular programming of monocytes by NCOR2
GSE97837	Histone modification (H3K4me3, H3K27ac, and H3K27me3) change during EBV infection in gastric epithelial cells
GSE97838	Genome-wide analysis of histone modification alteration at enhancer regions during epstein-barr virus infection.
GSE98052	Mapping the human DC lineage through the integration of high dimensional techniques
GSE98393	Selective expression of long non-coding RNAs in a breast cancer cell progression model
GSE98454	Pluripotent stem cell models of Blau syndrome reveal an IFN-<gamma>-dependent inflammatory response in macrophages
GSE98514	Expression profiling of four replicates of MCF-7 cells treated with 100nM TCDD
GSE98515	Expression profiling of MCF-7 cells with treatment of TCDD
GSE98551	Chromatin structure and CTCF across the MCF10 breast cancer progression series (ChIP-Seq)
GSE98552	Chromatin structure and CTCF across the MCF10 breast cancer progression series (HiC)
GSE98805	RNA-seq of head and neck cancer cell lines
GSE98811	RNA-seq and DNA methylation analysis in head and neck cancer cells and cell lines
GSE98922	Treatment of SW480 colon cancer cell induced xenografts with AZD and DBZ
GSE99822	zUMIs: a fast and flexible pipeline for RNA sequencing data with UMIs
GSE99824	Molecular pathogenesis of human prostate basal cell hyperplasia reveals a keratinocyte metaplasia
GSE100708	SLAM-seq defines direct gene-regulatory functions of the BRD4-MYC axis [SLAM-seq]
GSE100796	Human-specific features of special gene expression and regulation in eight brain regions
GSE101409	Subcellular profiling of macrophage long non-coding RNAs
GSE101745	Functional and genomic characterization of a xenograft model system for the study of metastasis in triple-negative breast cancer.
GSE101821	The novel BETi BI 894999 represses super-enhancer associated transcription and synergizes with CDK9 inhibition in AML by induction of apoptosis
GSE102045	G-Protein-Coupled Receptor 68 Negatively Regulates IL-22 Production in Human Th17 Cells
GSE102155	Mitotically associated long non-coding RNA, MANCR regulates cell cycle in triple negative breast cancer cells
GSE102183	Targeting the androgen receptor N-terminus via the cochaperone Bag-1L [RNA-seq C-terminal mutant]
GSE102395	Lack of Repressive Capacity of Human Promoter DNA Methylation identified through Genome-Wide Epigenomic Manipulation
GSE102436	Epigenetic and Expression Profiling of Tissue Selective Estrogen Compounds in Breast Epithelial Cell Lines (ChIP-seq)
GSE102469	Epigenetic and Expression Profiling of Tissue Selective Estrogen Compounds in Breast Epithelial Cell Lines (RNA-seq)
GSE102472	Epigenetic and Expression Profiling of Tissue Selective Estrogen Compounds in Breast Epithelial Cell Lines
GSE102851	Characterization of distinct states of human naive pluripotency
GSE103038	Genome-Wide DNA Methylation Profiling Identifies Differential Methylation in Uninvolved Psoriatic Epidermis
GSE103068	Synergistic activity of BET inhibitor BI 894999 with PLK inhibitor volasertib in AML in vitro and in vivo
GSE103568	Sensitive and powerful single-cell RNA sequencing using mcSCRB-seq
GSE104537	Integrated analysis of motif activity and gene expression changes of transcription factors
GSE105022	GATA2/3-TFAP2A/C transcription factor network couples human pluripotent stem cell differentiation to trophectoderm with repression of pluripotency
GSE106291	A 29-Gene and Cytogenetic Score for the Prediction of Resistance to Induction Treatment in Acute Myeloid Leukemia
GSE106920	Tissue-specific transcription reprogramming promotes liver metastasis of colorectal cancer (RNA-Seq)
GSE106921	Tissue-specific transcription reprogramming promotes liver metastasis of colorectal cancer (ChIP-Seq)
GSE106923	Tissue-specific transcription reprogramming promotes liver metastasis of colorectal cancer
GSE106949	Genome-wide analysis of PDX1 target genes in human pancreatic progenitors [ChIP-seq]
GSE106950	Genome-wide analysis of PDX1 target genes in human pancreatic progenitors
GSE107189	DNA methylation analysis of human keratoconus corneas using RRBS sequencing
GSE107248	Genome wide identification of MCM7 binding sites as replication origins
GSE107553	Cistrome analysis of SKI and RUNX1 in HL60
GSE107555	Transcriptome analysis of SKI knock-out in HL60 cells
GSE107556	Combined cistrome and transcriptome analysis of SKI in AML cells identifies SKI as a co-repressor for RUNX1
GSE107607	A modular dCas9-SunTag DNMT3A epigenome editing system overcomes pervasive off-target activity of direct fusion dCas9-DNMT3A constructs
GSE107609	Genomic occurrence analysis of PRMT6-dependent H3R2me2a
GSE107611	Transcriptome analysis of PRMT6 knock-out in NT2/D1 cells
GSE107612	Genomic location of PRMT6-dependent H3R2 methylation is decisive for the transcriptional outcome of associated genes
GSE108265	Region-specific alteration of histone modification by LSD1 inhibitor conjugated with pyrrole-imidazole polyamide
GSE108556	Genome-wide stability of DNA replication program in single mammalian cells
GSE109072	Toxicogenomics of the flame retardant tris (2-butoxyethyl) phosphate in HepG2 cells using RNA-seq.
GSE109377	Whole-genome mapping of RUNX1, FUBP1, H3K4me1, H3K4me3, H3K27me3 and H3K27ac in human pre-B lymphoblasts, and B cell precursor leukemia (BCP-ALL)
GSE109463	A toxicogenomics approach to screen chlorinated flame retardants tris(2-chloroethyl) phosphate and tris(2-chloroisopropyl) phosphate for potential health effects
GSE109996	Pro-inflammatory cytokine and high doses of ionizing radiation have similar effects on the expression of NF-kappaB-dependent genes [ChIP-seq]
GSE110222	Genome-wide maps of H3K27ac and H2A.Zac in HeLa K cells after depletion of PWWP2A by siRNA-mediated knockdown.
GSE110387	Pro-inflammatory cytokine and high doses of ionizing radiation have similar effects on the expression of NF-kappaB-dependent genes
GSE110800	RRAD, IL4I1, CDKN1A, and SERPINE1 genes are potentially co-regulated by NF-κB and p53 transcription factors in cells exposed to high doses of ionizing radiation [ChIP-Seq]
GSE111073	Expression profiling by RNA-Seq of breast cancer samples from patients in walnut-consuming and control groups
GSE111463	SLAM-seq defines direct gene-regulatory functions of the BRD4-MYC axis
GSE111469	PLAG1 and USF2 Co-regulate Expression of Musashi-2 in Human Hematopoietic Stem and Progenitor Cells
GSE111706	Metastasis in triple-negative breast cancer
GSE111880	Transcriptome analysis of total RNA in the Raji B cell line
GSE111881	Transcriptome analysis of total RNA in human osteosarcoma cell line U2OS before and after inhibition of zinc finger protein ZNF768
GSE111908	Pluripotent stem cell model of Nakajo-Nishimura syndrome untangles proinflammatory pathways mediated by oxidative stress
GSE112181	m7G methylation by METTL1 regulates let-7 microRNAs [BoRed-Seq & m7G-RIP-Seq A549]
GSE112182	m7G methylation by METTL1 regulates let-7 microRNAs
GSE112298	Gene Expression Analysis of metastatic CRPC cell line C4-2B treated with the dual BET-kinase inhibitor MA4-022-1
GSE112300	Identification of HOXB13 target genes responsive to BET inhibitors
GSE112463	Identification of Novel Regulatory Genes in APAP Induced Hepatocyte Toxicity by a Genome-Wide CRISPR-Cas9 Screen
GSE112482	Celll type specific gene expression from healthy human lung tissue infected with mycobacterium tuberculosis (ILC).
GSE112483	Celll type specific gene expression from healthy human lung tissue infected with mycobacterium tuberculosis (innate).
GSE113253	Osteogenesis depends on commissioning of a network of stem cell transcription factors that act as repressors of adipogenesis
GSE113399	SETDB1 compacts the inactive X chromosome in part through silencing an enhancer in the IL1RAPL1 gene
GSE113648	Quantitative whole transcriptomics sequencing of progeria-derived cells point to a key role of nucleotide metabolism in premature aging
GSE114931	Antigen-specific T-cell receptor signatures of cytomegalovirus infection
GSE115047	A chromatin integration labeling method enables lower-input epigenomic profiling
GSE115103	The CD4+ alike CD8+ memory T cell compartment diversification reveales CD8+ T cell subsets with cytotoxic and non-cytotoxic properties
GSE115284	RNA-seq of ML-2 acute myeloid leukemia cells overexpressed with GFP, FST317 and FST344
GSE116185	A NAFLD Model Created By Endoplasmic Reticulum Stress Response-Associated Steatosis in Human Induced Pluripotent Stem Cell-Derived Hepatocytes
GSE116284	NF-κB p65 dimerization and DNA-binding is important for inflammatory gene expression
GSE117190	Genome-wide DNA methylation change due to H19 knockdown and TET3 knockdown in UtLM
GSE117200	Genomic location of PRMT6-dependent H3R2 methylation is decisive for the transcriptional outcome of associated genes [ChIP-seq]
GSE117341	Repressive mark H3K27me3 in PRMT6 KO NT2/D1 cells
GSE117684	Whole-genome mapping of RUNX1, CBFA2T3, H3K4me1, H3K4me3, H3k27me3 and H3K27ac in pre-B lymphoblast models
GSE118453	Ehrlichia chaffeensis TRP47 binding sites in human genome
GSE120732	Transcriptome analysis of hiHepPCs in various culture conditions, human liver-derived hepatocytes, human liver-derived cholangiocytes, HUVECs, and HPBECs
GSE121363	Genome-wide contacts of rDNA units detected by 4C procedure in human genome [new]
GSE121370	Maintenance of mammary epithelial phenotype by AML1/RUNX1 through mitotic gene bookmarking
GSE121384	Verification and rectification of cell type-specific splicing of a Seckel syndrome-associated ATR mutation using iPS cell model
GSE121413	Genome-wide contacts of rDNA units detected by 4C procedure in human genome [old]
GSE121417	Genome-wide contacts of rDNA units detected by 4C procedure in human genome [old.hs]
GSE121418	Genome-wide contacts of rDNA units detected by 4C procedure in human genome
GSE122429	bulk RNA-seq of human nucleusus pulposus cell differentiations from embryonic stem cells and iPSCs
GSE122751	RNA sequencing data in AGS-BX1 cells treated with C7
GSE122922	AR-V7 targets the oncogenic genes in castration resistant prostate cancer. [ChIP]
GSE122923	AR-V7 targets the oncogenic genes in castration resistant prostate cancer. [RNA]
GSE122924	AR-V7 targets the oncogenic genes in castration resistant prostate cancer.
GSE124188	Genome-wide identification of 5hmCpGs in multiple myeloma
GSE124218	Human Bacille Calmette-Guérin vaccination elicits trained immunity via the hematopoietic progenitor compartment [bone marrow]
GSE124219	Human Bacille Calmette-Guérin vaccination elicits trained immunity via the hematopoietic progenitor compartment [ATAC-seq]
GSE124220	Human Bacille Calmette-Guérin vaccination elicits trained immunity via the hematopoietic progenitor compartment
GSE124876	Transcriptomic analysis of primary human T cells and murine RAW 264.7 macrophages 3D cultured in different collagen densities
GSE125768	Point mutations in the PDX1 transactivation domain impair human β-cell development and function (ChIP-Seq)
GSE125770	Point mutations in the PDX1 transactivation domain impair human β-cell development and function
GSE125982	Epigenetic homogeneity underlies sperm programming for embryonic transcription
GSE127969	Single-cell RNA-seq in monozygotic twins discordant for multiple sclerosis
GSE127983	Genome-wide mapping of SET-Nup214, mutant NPM1 (NPM1c), and CRM1-binding sites in human leukemia or mouse ES cell lines
GSE128259	Loss of DKM6A confers drug resistance in acute myeloid leukemia (ChIP-seq of AML cell lines MM-1 and MM-6)
GSE128261	Loss of DKM6A confers drug resistance in acute myeloid leukemia (ChIP-seq of AML cell lines K562 and THP-1)
GSE128262	Loss of DKM6A confers drug resistance in acute myeloid leukemia
GSE128798	Chemotherapeutic drugs inhibiting Topoisomerase 1 activity inhibit TNF-induced inflammatory gene expression
GSE129042	Identification of metabolically distinct adipocyte progenitor cells in human adipose tissues
GSE130262	RNA-Seq in HEK293T human cells
GSE130493	Heat-shock influence on gene expression in HEK293T human cells.
GSE130688	Annotation and functional characterization of long noncoding RNAs deregulated in pancreatic adenocarcinoma
GSE130947	Analyses of H2A and H2A.Z incorporations into chromatin of permeabilized cells
GSE131065	bulk RNA-seq of human nucleusus pulposus from scoliosis patients
GSE131473	Wnt activation as a therapeutic strategy in medulloblastoma
GSE132155	beta-glucan-induced trained immunity protects against Leishmania braziliensis infection: a crucial role for IL-32
GSE132215	The secretome of skin cancer cells activates the mTOR/MYC pathway in healthy keratinocytes and converts them into tumorigenic cells
GSE133473	Requirement for Cleavage Factor IIm in the Control of Alternative Polyadenylation in Breast Cancer Cells
GSE134612	Molecular mechanisms of transcriptional regulation by the nuclear zinc-finger protein ZFAT in HEK293 cells
GSE134717	Non-transmissible measles virus vector with segmented RNA genome establishes different types of iPSCs from hematopoietic cells
GSE135174	Genome-wide analysis of histone modification alteration in EBV(+) GC cell lines (4C-Seq).
GSE135176	Genome-wide analysis of histone modification alteration in EBV(+) GC cell lines
GSE135187	RNA profiling of human lymphatic endothelial cells exposed to melanoma exosomes
GSE135941	Genome-wide chromatin structure alteration during Epstein-Barr virus infection (Hi-C)
GSE137558	Heat Shock Factor 1 (HSF1) acquires transcriptional competence under 17b-estradiol in ERa-positive breast cancer cells [ChIP-seq]
GSE137560	Heat Shock Factor 1 (HSF1) acquires transcriptional competence under 17b-estradiol in ERa-positive breast cancer cells
GSE138329	Maintenance of epithelial traits and resistance to mesenchymal reprogramming promote proliferation in metastatic breast cancer
GSE138634	Single-cell DNA replication sequencing (scRepli-seq): a method for mapping replication timing domains genome wide in single mammalian cells
GSE138841	VAMP8 contributes to TRIM6-mediated type-I interferon antiviral response upon West Nile virus (WNV) infection
GSE138913	RNASeq of differentiated and undifferentiated BLaER1 cells
GSE139073	Multi-Parameter Analysis of Biobanked Human Bone Marrow Stromal Cells Shows Little Influence for Donor Age and Mild Comorbidities on Phenotypic and Functional Properties
GSE139913	Differential gene expression in circulating CD14+ monocytes indicates the prognosis of critically ill patients with sepsis
GSE139985	Histone Methylation Patterns in Acute Leukemias are Defined by Genotype Independent of the Disease Phenotype
GSE140441	EGFR/FOXO3a/BIM signalling pathway determines chemosensitivity of BMP4-differentiated glioma stem cells to temozolomide
GSE140472	ZBTB7A prevents RUNX1-RUNX1T1 dependent clonal expansion of human hematopoietic progenitor cells
GSE140782	Highly connected enhancer communities control lineage-determining genes in human mesenchymal stem cells
GSE141385	Epstein-Barr virus positive gastric cancer involves enhancer activation through ATF3
GSE141627	Functional plasticity and reversible growth behavior of patients’ acute myeloid leukemia stem cells growing in mice
GSE142503	ScRNA-seq analysis and functional characterization of myeloid lincRNAs differentially expressed during COVID-19
GSE143413	High-depth spatial transcriptome analysis by photo-isolation chemistry
GSE143679	Molecular comparison of an LSC population and a more differentiated cell population
GSE143780	Shear Stresses Associated with Cardiopulmonary Bypass Activate Expression Inflammatory Cytokines and Induce Necroptosis in Monocytes Via Calcium Dependent Signaling
GSE145532	DNA G-quadruplexes modulate highly transcribed genes in human chromatin [ATAC-seq]
GSE145535	DNA G-quadruplexes modulate highly transcribed genes in human chromatin [ChIPseq]
GSE145537	DNA G-quadruplexes modulate highly transcribed genes in human chromatin [RNA-seq]
GSE145543	DNA G-quadruplexes modulate highly transcribed genes in human chromatin
GSE145743	Genome-wide CRISPR knockout screen using GeCKO v2 to identify synthetic lethal interactions with the PARP inhibitor Olaparib
GSE145773	The RNA helicase DDX39B activates FOXP3 RNA splicing to control T regulatory cell fate
GSE146065	Impact of sustained TGFβ-receptor inhibition on chromatin accessibility and gene expression in cultured endometrial MSC [ATAC-Seq]
GSE146067	Impact of sustained TGFβ-receptor inhibition on chromatin accessibility and gene expression in cultured endometrial MSC
GSE146173	Clinical presentation and differential splicing of SRSF2, U2AF1 and SF3B1 mutations in patients with Acute Myeloid Leukemia
GSE146854	Transcriptome analysis of activated CD4+ T cells treated either with sodium butyrate or bufexamac
GSE147488	An autophagy CRISPR Screen in Jurkat cells
GSE147641	Chromatin accessibility analysis of intermediates during human primed and naïve reprogramming.
GSE147718	Co-Administration of Propionate or Protocatechuic Acid Does Not Affect DHA-Specific Transcriptional Effects on Lipid Metabolism in Cultured Hepatic Cells
GSE148520	Co-culture model of B-cell acute lymphoblastic leukemia recapitulates a transcription signature of chemotherapy-refractory minimal residual disease
GSE149694	Transcriptional analysis of intermediates during human primed and naïve reprogramming.
GSE149699	Single Cell RNA Sequencing of Cultured Primary Tissue Cells.
GSE149705	HCMV-UV and SeV-UV infection of IFNAR KO and wildtype human fibroblasts
GSE150364	Thyroid Hormone Receptor Beta Induces a Tumor Suppressive Program in Anaplastic Thyroid Cancer
GSE150521	β-catenin drives distinct transcriptional networks in proliferative and non-proliferative cardiomyocytes
GSE151479	Common Tumor Suppressive Signaling of Thyroid Hormone Receptor Beta in Breast and Thyroid Cancer Cells
GSE152804	Activation of SIRT6 by DNA hypomethylating agents and clinical consequences on combination therapy in leukemia
GSE152927	Glucose deprivation effect on Hepatocellular carcinoma cell line: Huh-7
GSE154972	Whole-genome analysis of noncoding genetic variations identifies multigranular regulatory element perturbations associated with Hirschsprung disease
GSE155680	RNA-seq analysis in young and senescent endothelial cells
GSE155889	Genome wide expression patterns of 19 human urinary cells as well as 6 primary urinary cells and 17 corresponding iPSCs of human, gorilla and orangutan
GSE156024	Maintenance of epithelial traits and resistance to mesenchymal reprogramming promote proliferation in metastatic breast cancer [ATAC-seq]
GSE157182	In vitro polarization of primary human blood derived macrophages
GSE157839	Stepwise chromatin loading of MCM hexamers toward onset of DNA replication
GSE159024	Epigenomic profiling by optimized ChIL-seq for tissue
GSE159144	SETD1A function is mediated through interaction with mitotic regulators BuGZ/BUB3 in leukemia [ChIP-seq]
GSE159146	SETD1A function is mediated through interaction with mitotic regulators BuGZ/BUB3 in leukemia.
GSE159296	Transient naive reprogramming corrects hiPS cells functionally and epigenetically [WGBS]
GSE159297	Transient naive reprogramming corrects hiPS cells functionally and epigenetically
GSE159724	Heat Shock Factor 1 (HSF1) supports the ESR1 action in breast cancer (ChIP-seq)
GSE159802	Heat Shock Factor 1 (HSF1) supports the ESR1 action in breast cancer (RNA-seq)
GSE159803	Heat Shock Factor 1 (HSF1) supports the ESR1 action in breast cancer
GSE160150	Identification of novel MeCP2 cancer-associated target genes and post-translational modifications
GSE160933	Transient naive reprogramming corrects hiPS cells functionally and epigenetically [WGBS 2]
GSE161099	IGF2BP1, a conserved regulator of RNA turnover in cancer [miRNA-seq]
GSE161101	IGF2BP1, a conserved regulator of RNA turnover in cancer
GSE161632	Cas9 interactions with host RNAs and transposable elements impair neurodevelopment (irCLIP-seq)
GSE161633	Cas9 interactions with host RNAs and transposable elements impair neurodevelopment (CUT&Tag)
GSE161635	Cas9 interactions with host RNAs and transposable elements impair neurodevelopment
GSE162623	Loss-of-function mutations in the histone methyltransferase EZH2 promote chemotherapy resistance in AML
GSE164224	Genome-wide analysis of gene expression in MKN7_EB by EHF knockdown (RNA-Seq).
GSE164225	MKN7_EB by EHF knockdown
GSE165774	Identification of novel DVL3 cancer-associated target genes [ChIP-seq]
GSE165775	Identification of novel DVL3 cancer-associated target genes
GSE168255	The RNA Helicase DHX16 Provides Specific Viral RNA for RIG-I to Trigger Innate Antiviral Immunity
GSE168656	T3-Dependent Transcriptional Programming by TR-beta Requires SWI/SNF Chromatin Remodelers (CUT&RUN)
GSE168952	T3-Dependent Transcriptional Programming by TR-beta Requires SWI/SNF Chromatin Remodelers (RNA-Seq)
GSE168953	T3-Dependent Transcriptional Programming by TR-beta Requires SWI/SNF Chromatin Remodelers (ATAC-Seq)
GSE168954	T3-Dependent Transcriptional Programming by TR-beta Requires SWI/SNF Chromatin Remodelers
GSE168997	Transcriptome analysis of human induced liver cancer-forming cells (iLCCs) , HepG2 cells, Huh6 cells, Huh7 cells, and HuCCT1 cells
GSE169059	RNA expression in KATOIII cells harboring biallelic deletions of the +22.6-kb site, epithelial-specific enchancer of ABO gene
GSE169623	The human monocyte model BLaER1 exhibits an epigenetic GPI anchor defect that impairs TLR4 signaling
GSE173074	DNA G-quadruplexes contribute to CTCF and cohesin recruitment
GSE173667	Heterozygous OAS1 Gain-of-Function Variants Cause a Polymorphic Autoinflammatory and Immunodeficiency Syndrome
GSE173955	Integrative analysis of altered genes expressed in human Alzheimer’s disease brain (RNA-Seq)
GSE174308	REST transcription factor holds the balance between the invasion and cell differentiation in IDH-mutant and IDH-wild type gliomas
GSE175551	BioVacSafe (Biomarkers for enhanced vaccine immunosafety) Influenza challenge
GSE175909	Genome-wide contacts of rDNA units detected by 4C procedure in human genome [hESM01]
GSE175910	Genome-wide contacts of rDNA units detected by 4C procedure in human genome [K562]
GSE176084	Whole-genome mapping of ETV6-RUNX1 in pre-B lymphoblast models
GSE178965	Gene expression profiling of newly-diagnosed DLBCL samples with RNA sequencing
GSE180371	Gene expression profile of human mesenchymal stromal cells (MSCs) exposed to hypoxic and pseudohypoxic preconditioning
GSE180581	Transcriptome data for HEK293T cells depleted of one subunit of DNA-PK complex: Ku70, Ku80 or DNA-PKcs.
GSE181187	Single cell analyses reveals a non-canonical EZH2 activity as main driver of RA resistance in PLZF/RARA leukemia [RNA-seq]
GSE181427	Analysis of human TAp63 regulated genes in CD4+ T cells
GSE181452	Bulk RNA-Seq of human thyroid organoids
GSE182760	RNA sequencing of patient derived xenograft sample AML-388 using prime-seq
GSE182780	RNA sequencing of patient derived xenograft sample ALL-811 using prime-seq
GSE183931	Transcriptome profilng of hMSC-hTERT20 cells undergoing osteogenic differentiation
GSE184011	RNA sequencing of preB-ALL NALM-6 cells with or without XIAP-knockdown, using prime-seq
GSE184087	Expression profiling of MIR181A1HG interference in hMSC-hTERT20 cells
GSE184273	hnRNPM, ELAVL1, and TBK1 form a type I interferon-inducing multiprotein complex downstream of cGAS and RIG-I
GSE184790	T cell transriptome in chromosome 22q11.2 deletion syndrome
GSE184956	Comparative transcriptome analysis in monocyte-derived macrophages of asymptomatic GBA mutation carriers and patients with GBA-associated Parkinson’s disease
GSE185009	Transcriptome analysis of IPSC and NPC, derived from twins, discordant by PD
GSE185863	Transcriptomic profiles revealed down regulation of low-density lipoprotein particle receptor activity pathway in survived from severe COVID-19-19.
GSE185951	Expression profiling of expressed RNAs during osteogenic differentiation of human donor mesenchymal stromal cells
GSE186004	Heat Shock Factor 1 (HSF1) regulates ESR1 action in breast cancer
GSE188445	Structural features within the NORAD long noncoding RNA underlie efficient repression of Pumilio activity
GSE189786	Targeted DamID to understand transcription factor genomic occupancy in human foetal lung progenitor cells
GSE189885	Human fetal lung tip progenitor cells
GSE189894	SETD1A regulates transcriptional pause release of heme biosynthesis genes in leukemia
GSE189895	Extra-hematopoietic immunomodulatory role of the guanine exchange factor DOCK-2 [RNA-Seq]
GSE189896	Extra-hematopoietic immunomodulatory role of the guanine exchange factor DOCK-2 [MethylCap-Seq]
GSE189898	Extra-hematopoietic immunomodulatory role of the guanine exchange factor DOCK-2
GSE190457	Chromatin accessibility profiling of B cell subsets
GSE190458	Expression profiling and chromatin accessibility profiling of B cell subsets
GSE190699	Fatty acid binding proteins contribute to multiple myeloma cell maintenance through regulation of Myc, the unfolded protein response, and metabolism
GSE190850	Aerosol delivery, but not intramuscular injection, of adenovirus-vectored tuberculosis vaccine induces respiratory-mucosal immunity in humans
GSE190994	SETD1A regulates transcriptional pause release of heme biosynthesis genes in leukemia [ChIP-Seq]
GSE193695	Identification of a drug-response gene in multiple myeloma through longitudinal single-cell transcriptome sequencing.
GSE193900	RNAseq of PURA knockdown in HeLa cells
GSE193901	iCLIP of endogenous PURA in HeLa cells
GSE193902	iCLIP of endogenous PURA in neuronal precursor cells
GSE193903	iCLIP of FLAG-PURA overexpression with anti-FLAG antibody in HeLa cells
GSE193904	iCLIP of FLAG-PURA overexpression with anti-PURA12D11 antibody in HeLa cells
GSE193905	Depletion of the RNA-binding protein PURA triggers changes in posttranscriptional gene regulation.
GSE194295	Batch effect during human bone marrow stromal cell propagation prevails donor variation and culture duration impact on phenotype, transcriptome and function [MethylCap-seq]
GSE194298	Batch effect during human bone marrow stromal cell propagation prevails donor variation and culture duration impact on phenotype, transcriptome and function [RNA-seq]
GSE194303	Batch effect during human bone marrow stromal cell propagation prevails donor variation and culture duration impact on phenotype, transcriptome and function
GSE196463	T-cell exhaustion induced by continuous bispecific antibody exposure is ameliorated by treatment-free intervals
GSE197960	Peaksat: An R package for ChIP-seq peak saturation analysis
GSE198016	Comprehensive genomic analysis of myeloid/natural killer cell precursor acute leukemia (MNKPL)
GSE201297	TE-derived small RNA analysis of human and chimpanzee iPS cells
GSE201298	ChIP-seq and Transcriptome analysis of human and chimpanzee iPS cells
GSE201396	bulk RNA-seq of human nucleusus pulposus from disc-degenerated patients
GSE201558	Bulk RNA-Seq of human thyroid organoids II
GSE201829	Genome-wide analysis of DSBs sites in HEK293T cells
GSE206357	Regulatory networks driving expression of genes critical for glioblastoma are controlled by the transcription factor c-Jun and the pre-existing epigenetic modifications
GSE206466	DAZL regulates proliferation of human primordial germ cell by direct binding to precursor miRNAs and enhances DICER processing activity
GSE206743	Effect of TGFB1 and Smad3 deficiency on doxorubicin cardiotoxity
GSE208031	PARP14 is a Novel Target in STAT6 Mutant Follicular Lymphoma
GSE208347	Transcriptome Profiling Reveals Differential Expression of Circadian Behavior Genes in Peripheral Blood of Monozygotic Twins Discordant for Parkinson's Disease
GSE211322	RNA-seq of head and neck cell lines
GSE211330	Target enrichment sequencing of head and neck cell lines
GSE211473	Genome-wide analysis of histone modification in UPCI-SCC-090, UM-SCC-104, FaDu and NP69SV40T.
GSE211489	Tumorigenic activation around HPV integrated sites in head and neck squamous cell carcinoma
GSE214931	BLM deficiency affects cytotoxicity of temozolomide and olaparib against human glioma cells and induces cellular senescence or polyploidy
GSE217701	Investigating the role of telomere length in 3D spatiotemporal gene regulation in cardiomyocytes [RNA-Seq]
GSE217703	Investigating the role of telomere length in 3D spatiotemporal gene regulation in cardiomyocytes
GSE217979	SFRP2 Overexpression Induces an Osteoblast-Like Phenotype in Prostate Cancer Cells
GSE218065	Single cell RNA-seq for human and bovine PBMCs stimulated with M. tuberculosis
GSE220806	Characteristic impairment of progesterone response in the cultured cervical fibroblast obtained from patients with refractory cervical insufficiency
GSE221872	Analysis of gene expression in Mel Z cells grown on Matrigel (MM).
GSE221873	Analysis of gene expression in Mel Z cells grown on Matrigel in the presence of inhibitor(MMI).
GSE221876	Analysis of gene expression in Mel Z cells grown on plastic (MP).
GSE221877	Analysis of gene expression in Mel Z cells grown on MM, MP, and with MMI
GSE224548	A two-step in vivo CRISPR screen unveils pervasive RNA binding protein dependencies for leukemic stem cells and identifies ELAVL1 as a therapeutic target
GSE225249	Enhancer infestation drives tumorigenic activation of inactive compartment in Epstein-Barr virus-positive nasopharyngeal carcinoma [Hi-C]
GSE225251	Enhancer infestation drives tumorigenic activation of inactive compartment in Epstein-Barr virus-positive nasopharyngeal carcinoma
GSE227512	Expression profiling of LINC01638 interference in hMSC-hTERT20 cells
GSE227546	Human alveolar hydrogels promote morphological and transcriptional differentiation in iPSC-derived alveolar type 2 epithelial cells
GSE227592	ADAR1 biology can hinder effective antiviral RNA interference
GSE228320	Whole blood transcriptional profiling of pulmonary functional sequelae in ARDS- secondary to SARS-CoV-2 infection
GSE228624	Carbonyl compounds in the gas phase are critical determinants of wood smoke toxicity
GSE229296	Long-range genomic contacts and spatiotemporal chromatin landscape of human histone gene clusters at Histone Locus Bodies during the cell cycle in breast cancer [cHiC]
GSE229297	Long-range genomic contacts and spatiotemporal chromatin landscape of human histone gene clusters at Histone Locus Bodies during the cell cycle in breast cancer
GSE230755	CSF3R T618I collaborates with RUNX1-RUNX1T1 to expand hematopoietic progenitors and sensitizes to GLI-inhibition
GSE232187	CSF3R T618I collaborates with RUNX1-RUNX1T1 to expand hematopoietic progenitors and sensitizes to GLI-inhibition [single-cell RNA-seq]
GSE232390	Analysis of gene expression changes in K562 erythroleukemia cells after erythroid differentiation caused by incubation in the presence hemin [RNA-Seq]
GSE232393	K562 erythroleukemia cells after erythroid differentiation caused by incubation in the presence of hemin
GSE238006	Neuroendocrine lineage commitment of small cell lung cancers can be leveraged into p53-independent non-cytotoxic therapy [RNA-seq]
GSE238007	Neuroendocrine lineage commitment of small cell lung cancers can be leveraged into p53-independent non-cytotoxic therapy
GSE239495	Canagliflozin mediates tumor suppression alone and in combination with radiotherapy in non-small cell lung cancer (NSCLC) through inhibition of HIF-1a
GSE239682	Inhibition of miR-497-5p improves keratinocyte function upon skin exposure to sulfur mustard
GSE239688	The SGLT2 inhibitor canagliflozin suppresses growth and enhances prostate cancer response to radiotherapy
GSE239918	Dynamic changes of mRNA expression during development of human embryonic stem cells derived cardiomyocytes
GSE241795	Effect of HSF1 overexpression in non-tumorigenic human breast epithelial MCF10A cell line
GSE246058	Somatic mutations of MLL4/COMPASS induce cytoplasmic localization providing insight into cancer prognosis and treatment
GSE248120	Unfolded protein Response is a major hurdle in direct neuronal reprogramming of human astrocytes [Bulk RNA-seq]
GSE248129	Unfolded protein Response is a major hurdle in direct neuronal reprogramming of human astrocytes
GSE248578	Butyrate and propionate are microbial danger signals that activate the NLRP3-inflammasome in human macrophages in the presence of TLR stimulation
GSE248579	Butyrate and propionate are microbial danger signals that activate the NLRP3-inflammasome in human macrophages in the presence of TLR stimulation
GSE249320	Dishevelled-1 regulates global transcriptomic changes in MDA-MB-231 triple negative breast cancer cells (ChIP-Seq).
GSE249323	Dishevelled-1 regulates global transcriptomic changes in MDA-MB-231 triple negative breast cancer cells
GSE250207	Aberrant upregulation of RUNX3 activates developmental genes to drive metastasis in gastric cancer (RNA-seq)
GSE250479	Aberrant upregulation of RUNX3 activates developmental genes to drive metastasis in gastric cancer (ChIP-seq)
GSE250481	Aberrant upregulation of RUNX3 activates developmental genes to drive metastasis in gastric cancer.
GSE250617	GQIcombi application to subdue glioma via differentiation therapy
GSE252276	RNA-seq analysis of trans-differentiated ARPE-19 cells transduced by AAV9-AIPL1 vectors
GSE253100	Quantitative live-cell imaging of secretion activity reveals dynamic immune responses
GSE255581	GDNF/GFRA1 signaling contributes to chemo- and radioresistance in glioblastoma
GSE258788	BOD1L mediates chromatin binding and non-canonical function of H3K4 methyltransferase SETD1A (ChIP-seq)
GSE258792	BOD1L mediates chromatin binding and non-canonical function of H3K4 methyltransferase SETD1A.
GSE260991	Single-cell 3D genome structure reveals distinct human pluripotent states (ATAC-Seq)
GSE260993	Single-cell 3D genome structure reveals distinct human pluripotent states (CUT&Tag-seq)
GSE260994	Single-cell 3D genome structure reveals distinct human pluripotent states (RNA-Seq)
GSE260995	Single-cell 3D genome structure reveals distinct human pluripotent states
GSE260999	Evolution of T-Cell Fitness through AML Progression: Enhanced Bispecific T-Cell Engager-mediated Function of Bone Marrow T Cells at Remission Compared to Initial Diagnosis and Relapse [epigenome analysis]
GSE261000	Evolution of T-Cell Fitness through AML Progression: Enhanced Bispecific T-Cell Engager-mediated Function of Bone Marrow T Cells at Remission Compared to Initial Diagnosis and Relapse [transcriptome analysis]
GSE261888	Global gene expression profile of colon biopsy samples from healthy patients and colorectal cancer.
GSE270880	TSPO deficiency promotes the progression of malignant peripheral sheath tumors by regulating the G2/M phase of the cell cycle via CDK1
GSE272394	Inflammatory intracellular signaling in neurons is influenced by glial soluble factors in iPSC-based cell model of PARK2-associated Parkinson’s disease