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Series GSE93385 Query DataSets for GSE93385
Status Public on Feb 17, 2017
Title Differential responses of human fetal brain neural stem cells to Zika virus infection
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary Purpose: The goal of this study is to investigate the effect of Zika virus infection on neural stem cells
Methods: RNA-Seq transcriptome analysis of neural stem cells infected with Zika virus compared to mock infected
Overall design RNA-seq transcriptome profiling of Zika infected human fetal neural stem cells
Contributor(s) McGrath EL, Rossi SL, Gao J, Widen SG, Grant AC, Dunn TJ, Azar SR, Roundy CM, Xiong Y, Prusak DJ, Loucas BD, Wood TG, Yu Y, Fernández-Salas I, Weaver SC, Vasilakis N, Wu P
Citation(s) 28216147
NIH grant(s)
Grant ID Grant title Affiliation Name
R21 AI129509 A novel system using human fetal brain neural stem cell to model ZIKV infection UNIVERSITY OF TEXAS MEDICAL BRANCH AT GALVESTON Ping Wu
R24 AI120942 World Reference Center for Emerging Viruses and Arboviruses (WRCEVA) UNIVERSITY OF TEXAS MEDICAL BRANCH AT GALVESTON Scott C Weaver
T32 DA007287 Neural and Pharmacological Mechanisms of Abused Drugs UNIVERSITY OF TEXAS MEDICAL BRANCH AT GALVESTON Kathryn A. Cunningham
Submission date Jan 10, 2017
Last update date May 15, 2019
Contact name Ping Wu
Organization name University of Texas Medical Branch
Street address 301 University Blvd
City Galveston
State/province Texas
ZIP/Postal code 77555-0620
Country USA
Platforms (1)
GPL18460 Illumina HiSeq 1500 (Homo sapiens)
Samples (18)
GSM2452280 K048_Control-1
GSM2452281 K048_Control-2
GSM2452282 K048_Control-3
BioProject PRJNA360845
SRA SRP096367

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Supplementary file Size Download File type/resource
GSE93385_gene_exp.diff.gz 13.1 Mb (ftp)(http) DIFF
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Raw data are available in SRA
Processed data are available on Series record

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