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Series GSE181427 Query DataSets for GSE181427
Status Public on Apr 10, 2023
Title Analysis of human TAp63 regulated genes in CD4+ T cells
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary By comparing the comprehensive gene expression profiles between human Th17 cells overexpressing TAp63 and those with TAp63 knockdown, FOXP3 was identified as one of the downregulated genes by TAp63
Overall design Human Th17 cells were infected with retrovirus of LMP-non-silencing-IRES-Thy1.1 or LMP-hTAp63KD1-IRES-Thy1.1, and pMXs-IRES-NGFR or pMXs-hTAp63a-IRES-NGFR. Infected cells were sorted and subjected to RNA-sequence analysis.
Contributor(s) Suto A, Suga K, Tanaka S
Citation(s) 37212280
Submission date Aug 03, 2021
Last update date Jul 10, 2023
Contact name Shigeru Tanaka
Organization name Chiba University
Department Allergy and Clinical Immunology
Street address 1-8-1 Inohana
City Chiba
ZIP/Postal code 2608670
Country Japan
Platforms (1)
GPL18460 Illumina HiSeq 1500 (Homo sapiens)
Samples (4)
GSM5502295 Sample 5_pMX
GSM5502296 Sample 6_pMX_TAp63
GSM5502297 Sample 7_LMP
BioProject PRJNA751975
SRA SRP331144

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE181427_RAW.tar 790.0 Kb (http)(custom) TAR (of TXT)
GSE181427_htseqcount+row_name.human.hg38.txt.gz 1.3 Mb (ftp)(http) TXT
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file
Processed data are available on Series record

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