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Sample GSM1666045 Query DataSets for GSM1666045
Status Public on Apr 24, 2015
Title PC03
Sample type SRA
 
Source name A375p cells
Organism Homo sapiens
Characteristics cell line: melanoma cell line A375P
agent: CONTROL
Treatment protocol 10 μM of either DEL22379, SCH772984 or DMSO as a control for two hours
Extracted molecule polyA RNA
Extraction protocol RNeasy mini kit (Qiagen, Germany)
TruSeq Stranded mRNA Illumina
 
Library strategy RNA-Seq
Library source transcriptomic
Library selection cDNA
Instrument model Illumina HiSeq 1500
 
Data processing Alignment with Tophat
Differential Expression with Cufflinks and DE
Genome_build: hg19
Supplementary_files_format_and_content: The .txt and .csv files include FPKM values for each Sample and Differential Expression
 
Submission date Apr 24, 2015
Last update date May 15, 2019
Contact name Piero Crespo
E-mail(s) crespop@unican.es
Phone 942200959
Organization name IBBTEC
Street address c/Albert Einstein, 22
City SANTANDER
State/province Cantabria
ZIP/Postal code 39011
Country Spain
 
Platform ID GPL18460
Series (1)
GSE68230 Small molecule inhibition of ERK dimerization prevents tumorigenesis by Ras-ERK pathway oncogenes
Relations
BioSample SAMN03566804
SRA SRX1008069

Supplementary data files not provided
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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