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Sample GSM1666044 Query DataSets for GSM1666044
Status Public on Apr 24, 2015
Title PC02
Sample type SRA
Source name A375p cells
Organism Homo sapiens
Characteristics cell line: melanoma cell line A375P
agent: CONTROL
Treatment protocol 10 μM of either DEL22379, SCH772984 or DMSO as a control for two hours
Extracted molecule polyA RNA
Extraction protocol RNeasy mini kit (Qiagen, Germany)
TruSeq Stranded mRNA Illumina
Library strategy RNA-Seq
Library source transcriptomic
Library selection cDNA
Instrument model Illumina HiSeq 1500
Data processing Alignment with Tophat
Differential Expression with Cufflinks and DE
Genome_build: hg19
Supplementary_files_format_and_content: The .txt and .csv files include FPKM values for each Sample and Differential Expression
Submission date Apr 24, 2015
Last update date May 15, 2019
Contact name Piero Crespo
Phone 942200959
Organization name IBBTEC
Street address c/Albert Einstein, 22
State/province Cantabria
ZIP/Postal code 39011
Country Spain
Platform ID GPL18460
Series (1)
GSE68230 Small molecule inhibition of ERK dimerization prevents tumorigenesis by Ras-ERK pathway oncogenes
BioSample SAMN03566803
SRA SRX1008068

Supplementary data files not provided
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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