NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Series GSE106949 Query DataSets for GSE106949
Status Public on Feb 27, 2018
Title Genome-wide analysis of PDX1 target genes in human pancreatic progenitors [ChIP-seq]
Organism Homo sapiens
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary We performed ChIP-seq of PDX1 and H3K27ac on XM001 cells at PP stage
 
Overall design We performed ChIP-seq of PDX1 and H3K27ac on XM001 cells at PP stage
 
Contributor(s) Wang X, Sterr M, Burtscher I, Chen S, Hieronimus A, Machicao F, Staiger H, Häring H, Lederer G, Meitinger T, Cernilogar FM, Schotta G, Irmler M, Beckers J, Hrabě de Angelis M, Wright CV, Bakhti M, Lickert H
Citation(s) 29396371, 30930126
Submission date Nov 15, 2017
Last update date Jun 19, 2019
Contact name Heiko Lickert
E-mail(s) heiko.lickert@helmholtz-munich.de
Organization name Helmholtz Zentrum München German Research Center for Environmental Health
Department Institute of Diabetes and Regeneration Research
Street address Ingolstaedter Landstraße 1
City Neuherberg
ZIP/Postal code 85764
Country Germany
 
Platforms (1)
GPL18460 Illumina HiSeq 1500 (Homo sapiens)
Samples (8)
GSM2858064 XM001-PP_H3K27ac_Lane1_TAGCTT
GSM2858065 XM001-PP_H3K27ac_Lane2_TAGCTT
GSM2858066 XM001-PP_H3K27ac_Lane3_TAGCTT
This SubSeries is part of SuperSeries:
GSE106950 Genome-wide analysis of PDX1 target genes in human pancreatic progenitors
Relations
BioProject PRJNA418487
SRA SRP125047

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE106949_XM001-PP_H3K27ac_TAGCTT_BCP-HM_Peaks.bed.gz 522.9 Kb (ftp)(http) BED
GSE106949_XM001-PP_PDX1_CTTGTA_GEM_events_Filtered_Merged.bed.gz 115.6 Kb (ftp)(http) BED
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap