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Status |
Public on Nov 20, 2019 |
Title |
Genome-wide mapping of SET-Nup214, mutant NPM1 (NPM1c), and CRM1-binding sites in human leukemia or mouse ES cell lines |
Organisms |
Homo sapiens; Mus musculus |
Experiment type |
Genome binding/occupancy profiling by high throughput sequencing
|
Summary |
We used ChIP-seq to examine the genome-wide binding of CRM1, SET-Nup214, and NPM1c in leukemia cell lines. Our analysis revealed that CRM1, SET-Nup214, and NPM1c are preferentially targeted to HOX cluster regions.
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Overall design |
chromatin immunoprecipitation
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Contributor(s) |
Oka M, Yoneda Y, Nogami J, Maehara K, Harada A, Ohkawa Y |
Citation(s) |
31755865 |
|
Submission date |
Mar 07, 2019 |
Last update date |
Nov 25, 2019 |
Contact name |
Masahiro Oka |
Organization name |
National Institutes of Biomedical Innovation, Health and Nutrition (NIBIOHN)
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Lab |
Laboratory of Nuclear Transport Dynamics
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Street address |
7-6-8 Saito-Asagi
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City |
Ibaraki |
State/province |
Osaka |
ZIP/Postal code |
567-0085 |
Country |
Japan |
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Platforms (2) |
GPL18460 |
Illumina HiSeq 1500 (Homo sapiens) |
GPL18480 |
Illumina HiSeq 1500 (Mus musculus) |
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Samples (32)
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Relations |
BioProject |
PRJNA525993 |
SRA |
SRP187841 |