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| Status |
Public on Sep 15, 2023 |
| Title |
Single cell RNA-seq for human and bovine PBMCs stimulated with M. tuberculosis |
| Organisms |
Homo sapiens; Bos taurus |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
We propose a custom pipeline for combining data from experiments on multispecies studies tested on data from human and bovine peripheral blood mononuclear cellssamples, stimulated with Mycobacterium tuberculosis.
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| Overall design |
PBMC samples from cattle and human were isolated using pancoll (Pan-Biotech) gradient density centrifugation following the manufacturer’s protocol and analysed using scRNAseq.
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| Contributor(s) |
Papiez A |
| Citation missing |
Has this study been published? Please login to update or notify GEO. |
| |
| Submission date |
Nov 15, 2022 |
| Last update date |
Sep 15, 2023 |
| Contact name |
Anna Papiez |
| Organization name |
Silesian University of Technology
|
| Department |
Department of Data Science and Engineering
|
| Street address |
Akademicka 16
|
| City |
Gliwice |
| ZIP/Postal code |
44-100 |
| Country |
Poland |
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| Platforms (2) |
| GPL18460 |
Illumina HiSeq 1500 (Homo sapiens) |
| GPL22316 |
Illumina HiSeq 1500 (Bos taurus) |
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| Samples (4)
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| Relations |
| BioProject |
PRJNA902014 |
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