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| Status |
Public on Mar 01, 2017 |
| Title |
TT-seq captures simultaneous activation of eRNAs and promoters during T cell activation |
| Organism |
Homo sapiens |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
Jurkat T cells were activated with PMA and ionomycin. Total and Labeled fragmented RNA was extracted every 5 minutes during a time course up to 15min after activation. Biological duplicates of all samples were sequenced on a HiSeq 1500
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| |
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| Overall design |
Jurkat T cells were activated with PMA and ionomycin. Total and Labeled fragmented RNA was extracted every 5 minutes during a time course up to 15min after activation. Biological duplicates of all samples were sequenced on a HiSeq 1500
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| |
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| Contributor(s) |
Michel M, Demel C, Zacher B, Schwalb B, Krebs S, Blum H, Gagneur J, Cramer P |
| Citation(s) |
28270558 |
| |
| Submission date |
Aug 04, 2016 |
| Last update date |
Jun 11, 2020 |
| Contact name |
Carina Demel |
| E-mail(s) |
cdemel@mpibpc.mpg.de
|
| Organization name |
Max-Planck Institute for biophysical Chemistry
|
| Street address |
Am Fassberg 11
|
| City |
Göttingen |
| ZIP/Postal code |
37077 |
| Country |
Germany |
| |
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| Platforms (1) |
| GPL18460 |
Illumina HiSeq 1500 (Homo sapiens) |
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| Samples (12)
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| Relations |
| BioProject |
PRJNA336546 |
| SRA |
SRP080943 |
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