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Status |
Public on Sep 27, 2018 |
Title |
Transcriptome analysis of PRMT6 knock-out in NT2/D1 cells |
Organism |
Homo sapiens |
Experiment type |
Expression profiling by high throughput sequencing
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Summary |
Whole transcriptome for PRMT6 knock-out and control NT2/D1 cells with and without ATRA (all-trans retinoic acid) was sequenced. These samples were compared to each other to find differentially regulated genes and PRMT6-dependent transcriptome in pluripotency and differentiating cells.
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Overall design |
Examining of PRMT6-dependent transcriptome in NT2/D1 cells using RNAseq.
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Contributor(s) |
Bouchard C, Sahu P, Nötzold RR, Bauer UM |
Citation(s) |
30232013 |
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Submission date |
Dec 01, 2017 |
Last update date |
May 15, 2019 |
Contact name |
Uta Maria Bauer |
E-mail(s) |
bauer@imt.uni-marburg.de
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Organization name |
Philipps University Marburg
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Department |
Institute of Molecular Biology and Tumor Research
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Lab |
AG Bauer
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Street address |
Hans-Meerwein-Str. 2
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City |
Marburg |
State/province |
Hessen |
ZIP/Postal code |
35043 |
Country |
Germany |
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Platforms (1) |
GPL18460 |
Illumina HiSeq 1500 (Homo sapiens) |
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Samples (12)
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This SubSeries is part of SuperSeries: |
GSE107612 |
Genomic location of PRMT6-dependent H3R2 methylation is decisive for the transcriptional outcome of associated genes |
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Relations |
BioProject |
PRJNA420764 |
SRA |
SRP125977 |