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Series GSE107248 Query DataSets for GSE107248
Status Public on Nov 23, 2017
Title Genome wide identification of MCM7 binding sites as replication origins
Organism Homo sapiens
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary Here, we precisely determined MCM7 binding sites inHeLa cells by ChIP-Seq, classified them into firing and dormant replication origins using SNS data deposited, and analyzed their association with various chromatin signatures.
Overall design ChIP-Seq of MCM7 in HeLa cells. BioProject: PRJDB2761, Accession: DRA001271 (DRP001342); BioProject: PRJDB5845, Accession: DRA005864 (DRP003852).
Contributor(s) Sugimoto N, Maehara K, Yoshida K, Ohkawa Y, Fujita M
Citation(s) 29893900
BioProject PRJDB2761, PRJDB5845
Submission date Nov 21, 2017
Last update date May 15, 2019
Contact name Nozomi Sugimoto
Organization name Kyushu University
Street address 3-1-1, Maidashi, Higashiku
City Fukuoka
ZIP/Postal code 812-0054
Country Japan
Platforms (1)
GPL18460 Illumina HiSeq 1500 (Homo sapiens)
Samples (4)
GSM2863238 Input exp1
GSM2863239 ChIP-Seq MCM7 exp1
GSM2863240 Input exp2
SRA DRP001342
SRA DRP003852

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE107248_MCM7ChIP_exp1.txt.gz 2.7 Mb (ftp)(http) TXT
GSE107248_MCM7ChIP_exp2.txt.gz 4.0 Mb (ftp)(http) TXT
GSE107248_RAW.tar 632.3 Mb (http)(custom) TAR (of BW)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file
Processed data are available on Series record

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