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Series GSE110387 Query DataSets for GSE110387
Status Public on Feb 08, 2018
Title Pro-inflammatory cytokine and high doses of ionizing radiation have similar effects on the expression of NF-kappaB-dependent genes
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Genome binding/occupancy profiling by high throughput sequencing
Summary This SuperSeries is composed of the SubSeries listed below.
 
Overall design Refer to individual Series
 
Citation(s) 29476964, 30419821
Submission date Feb 08, 2018
Last update date Mar 27, 2019
Contact name Tomasz Stokowy
E-mail(s) tomasz.stokowy@uib.no
Organization name University of Bergen
Department IT Division
Lab Scientific Computing
Street address Nygardsgaten 5
City Bergen
ZIP/Postal code 5020
Country Norway
 
Platforms (3)
GPL9115 Illumina Genome Analyzer II (Homo sapiens)
GPL16791 Illumina HiSeq 2500 (Homo sapiens)
GPL18460 Illumina HiSeq 1500 (Homo sapiens)
Samples (63)
GSM2975776 U2OS_Input
GSM2975777 U2OS_control
GSM2975778 U2OS_TNFalpha_30min
This SuperSeries is composed of the following SubSeries:
GSE109996 Pro-inflammatory cytokine and high doses of ionizing radiation have similar effects on the expression of NF-kappaB-dependent genes [ChIP-seq]
GSE110386 Pro-inflammatory cytokine and high doses of ionizing radiation have similar effects on the expression of NF-kappaB-dependent genes [RNA-seq]
GSE110762 RRAD, IL4I1, CDKN1A, and SERPINE1 genes are potentially co-regulated by NF-κB and p53 transcription factors in cells exposed to high doses of ionizing radiation [RNA-Seq]
Relations
BioProject PRJNA433581

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE110387_RAW.tar 610.0 Kb (http)(custom) TAR (of BED, TXT)
SRA Run SelectorHelp

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