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| Status |
Public on Dec 05, 2019 |
| Title |
Genome-wide contacts of rDNA units detected by 4C procedure in human genome [old.hs] |
| Organism |
Homo sapiens |
| Experiment type |
Genome binding/occupancy profiling by high throughput sequencing
|
| Summary |
4C procedure was used for analysis of genomic contacts of rDNA units in HEK 293T cells. The primers for 4C were selected downstream from EcoRI site at coordinate 30487 in rDNA sequence with Accession number U13369.1.
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| |
|
| Overall design |
Examination of rDNA genome-wide contacts in HEK 293T cells using 4C approach.
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| |
|
| Contributor(s) |
Tchurikov NA, Kravatsky YV, Kretova OV |
| Citation(s) |
31694324 |
| |
| Submission date |
Oct 17, 2018 |
| Last update date |
Dec 11, 2019 |
| Contact name |
Nickolai Tchurikov |
| E-mail(s) |
tchurikov@eimb.ru
|
| Organization name |
Engelhardt Institute of Molecular Biology
|
| Department |
Department of Epigenetic Mechanisms of Gene Expression Regulation
|
| Street address |
32, Vavilova str.
|
| City |
Moscow |
| ZIP/Postal code |
119991 |
| Country |
Russia |
| |
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| Platforms (1) |
| GPL18460 |
Illumina HiSeq 1500 (Homo sapiens) |
|
| Samples (2) |
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| This SubSeries is part of SuperSeries: |
| GSE121418 |
Genome-wide contacts of rDNA units detected by 4C procedure in human genome |
|
| Relations |
| BioProject |
PRJNA497288 |
| SRA |
SRP166016 |
