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Platform GPL5106 Query DataSets for GPL5106
Status Public on Apr 20, 2007
Title mirVANA miRNA Bioarray V2
Technology type spotted oligonucleotide
Distribution custom-commercial
Organisms Homo sapiens; Mus musculus; Rattus norvegicus
Manufacturer Ambion, Inc.
Manufacture protocol CodeLink(tm) Activated Slides are designed to covalently immobilize amine-modified DNA for microarrays. They are easy to use and are compatible with most available arraying and scanning instruments. CodeLink Activated Slides are coated with a novel 3-D surface chemistry comprised of a long-chain, hydrophilic polymer containing amine-reactive groups. This polymer is covalently crosslinked to itself and to the surface of the slide. The crosslinked polymer, combined with end-point attachment, orients the immobilized DNA, and holds it away from the surface of the slide.
Technical specifications:
Slide dimensions: 25 × 75 × 1 mm
1× Printing buffer: 50 mM sodium phosphate at pH 8.5
Codelink slides are manufacured by SurModics and were formally sold as 3D-Link(tm) Activated Slides.
Catalog number AM1566V2
Support glass
Coating other
 
Description Manufactured using GE Healthcare’s CodeLink (TM) 3-D Gel Matrix Technology
Surface type: non-adsorptive
Attachment: covalent
The mirVana miRNA Bioarrays are an Ambion product that is manufactured by GE Healthcare and incorporates the CodeLink™ 3-D Gel Matrix slide surface. This aqueous environment elevates the probes away from the surface of the slide, allowing for maximum interaction between the probes and targets.
 
Web link http://www.ambion.com/catalog/CatNum.php?1566V2
Submission date Apr 19, 2007
Last update date Jul 01, 2009
Contact name Manabu Harada
E-mail(s) harada@filgen.jp
Organization name Filgen,Inc.
Department Biosciences
Street address 15-1 Nakanoshima, Ohdaka-cho, Midori-ku
City Nagoya
State/province aichi
ZIP/Postal code 459-8001
Country Japan
 
Samples (576) GSM234650, GSM234651, GSM234652, GSM234653, GSM234654, GSM234655 
Series (14)
GSE9234 Correlation of microRNA levels during hypoxia with predicted target mRNAs through genome-wide microarray analysis
GSE10833 miRNA Cancer Cell Line Profiles
GSE13858 Global survey of miRNA microarray of uterus, ovariectomized female mice with or without estrogen (E2) treatment

Data table header descriptions
ID
Probe Name miRBase miRNA Gene Name or the name of the control on the array
Human Mature Name miRBase human miRNA Gene Name
Mouse Mature Name miRBase mouse miRNA Gene Name
Rat Mature Name miRBase Rat miRNA Gene Name
Human Mature Sanger Accession miRBase Accession Number （human）
Mouse Mature Sanger Accession miRBase Accession Number （mouse）
Rat Mature Sanger Accession miRBase Accession Number (Rat)
SEQUENCE Mature miRNA Sequence
Product ID (V1) Product ID (V1)
miRNA Source miRNA Source
SPOT_ID

Data table
ID Probe Name Human Mature Name Mouse Mature Name Rat Mature Name Human Mature Sanger Accession Mouse Mature Sanger Accession Rat Mature Sanger Accession SEQUENCE Product ID (V1) miRNA Source SPOT_ID
BM11267 ambi_miR_1006 hsa-abi-1006 NA NA N/A NA NA N/A* N/A Ambion ambi_miR_1006
BM11194 ambi_miR_10064 hsa-abi-10064 NA NA N/A NA NA N/A* N/A Ambion ambi_miR_10064
BM11277 ambi_miR_10133 hsa-abi-10133 NA NA N/A NA NA N/A* N/A Ambion ambi_miR_10133
BM11202 ambi_miR_10202 hsa-abi-10202 NA NA N/A NA NA N/A* N/A Ambion ambi_miR_10202
BM11221 ambi_miR_10203 hsa-abi-10203 NA NA N/A NA NA N/A* N/A Ambion ambi_miR_10203
BM11262 ambi_miR_10394 hsa-abi-10394 NA NA N/A NA NA N/A* N/A Ambion ambi_miR_10394
BM11230 ambi_miR_10411 hsa-abi-10411 NA NA N/A NA NA N/A* N/A Ambion ambi_miR_10411
BM11218 ambi_miR_10594 hsa-abi-10594 NA NA N/A NA NA N/A* N/A Ambion ambi_miR_10594
BM11256 ambi_miR_10617 hsa-abi-10617 NA NA N/A NA NA N/A* N/A Ambion ambi_miR_10617
BM11257 ambi_miR_10751 hsa-abi-10751 NA NA N/A NA NA N/A* N/A Ambion ambi_miR_10751
BM11239 ambi_miR_10766 hsa-abi-10766 NA NA N/A NA NA N/A* N/A Ambion ambi_miR_10766
BM11278 ambi_miR_10769 hsa-abi-10769 NA NA N/A NA NA N/A* N/A Ambion ambi_miR_10769
BM11210 ambi_miR_10994 hsa-abi-10994 NA NA N/A NA NA N/A* N/A Ambion ambi_miR_10994
BM11249 ambi_miR_11040 hsa-abi-11040 NA NA N/A NA NA N/A* N/A Ambion ambi_miR_11040
BM11289 ambi_miR_11143 hsa-abi-11143 NA NA N/A NA NA N/A* N/A Ambion ambi_miR_11143
BM11222 ambi_miR_11146 hsa-abi-11146 NA NA N/A NA NA N/A* N/A Ambion ambi_miR_11146
BM11214 ambi_miR_11168 hsa-abi-11168 NA NA N/A NA NA N/A* N/A Ambion ambi_miR_11168
BM11260 ambi_miR_1137 hsa-abi-1137 NA NA N/A NA NA N/A* N/A Ambion ambi_miR_1137
BM11242 ambi_miR_11541 hsa-abi-11541 NA NA N/A NA NA N/A* N/A Ambion ambi_miR_11541
BM11246 ambi_miR_11576 hsa-abi-11576 NA NA N/A NA NA N/A* N/A Ambion ambi_miR_11576

Total number of rows: 662

Table truncated, full table size 71 Kbytes.




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