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GEO accession:
Sample GSM274550
Query DataSets for GSM274550
Status
Public on Dec 01, 2008
Title
miRNA Replicate 1 for 537MEL cell line
Sample type
other
Source name
Human cell line
Organism
Homo sapiens
Characteristics
No treatment. See ATCC/DSMZ for cell line details.
Extracted molecule
other
Extraction protocol
mirVana kit (Ambion)
Label
mirVana Kit (Ambion)
Label protocol
Asuragen Services
Hybridization protocol
Asuragen Services
Scan protocol
Asuragen Services
Description
Cell line, RPMI1640, 10 %FBS, 2mM L-glutamine, 10mM HEPES
Data processing
VSN / Only considered known human miRNAs with duplicate probes/experiments averaged
Submission date
Mar 14, 2008
Last update date
Mar 19, 2008
Contact name
Alex T. Adai
E-mail(s)
adai.alex@gene.com
Organization name
Genentech
Department
Oncology Diagnostics
Lab
David Dornan
Street address
X
City
X
State/province
X
ZIP/Postal code
X
Country
USA
Platform ID
GPL5106
Series (1)
GSE10833
miRNA Cancer Cell Line Profiles
Data table header descriptions
ID_REF
microRNA
VALUE
Log base 2 of signal intensity (VSN Normalized)
Data table
ID_REF
VALUE
BM10004
6.096
BM10017
2.5429
BM10022
2.2784
BM10032
3.2726
BM10034
1.6775
BM10049
5.7223
BM10050
12.662
BM10056
10.347
BM10057
7.8083
BM10063
1.0464
BM10065
1.0464
BM10067
8.3548
BM10070
1.0464
BM10071
2.5429
BM10073
2.2784
BM10081
1.0464
BM10083
4.668
BM10084
2.7805
BM10085
7.9391
BM10086
1.6775
Total number of rows:
328
Table truncated, full table size
4 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM274550.gpr.gz
54.6 Kb
(ftp)
(http)
GPR
Processed data included within Sample table
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