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GEO accession:
Sample GSM274306
Query DataSets for GSM274306
Status
Public on Dec 01, 2008
Title
miRNA Replicate 1 for H647 cell line
Sample type
other
Source name
Human cell line
Organism
Homo sapiens
Characteristics
No treatment. See ATCC/DSMZ for cell line details.
Extracted molecule
other
Extraction protocol
mirVana kit (Ambion)
Label
mirVana Kit (Ambion)
Label protocol
Asuragen Services
Hybridization protocol
Asuragen Services
Scan protocol
Asuragen Services
Description
Cell line, RPMI1640, 10 %FBS, 2mM L-glutamine, 10mM HEPES
Data processing
VSN / Only considered known human miRNAs with duplicate probes/experiments averaged
Submission date
Mar 14, 2008
Last update date
Mar 19, 2008
Contact name
Alex T. Adai
E-mail(s)
adai.alex@gene.com
Organization name
Genentech
Department
Oncology Diagnostics
Lab
David Dornan
Street address
X
City
X
State/province
X
ZIP/Postal code
X
Country
USA
Platform ID
GPL5106
Series (1)
GSE10833
miRNA Cancer Cell Line Profiles
Data table header descriptions
ID_REF
microRNA
VALUE
Log base 2 of signal intensity (VSN Normalized)
Data table
ID_REF
VALUE
BM10004
6.3967
BM10017
3.8184
BM10022
4.9863
BM10032
2.6657
BM10034
1.2746
BM10049
1.7798
BM10050
13.424
BM10056
8.6669
BM10057
8.1503
BM10063
2.2543
BM10065
1.6543
BM10067
7.4324
BM10070
0.19081
BM10071
0.28095
BM10073
2.4685
BM10081
1.6543
BM10083
3.8184
BM10084
3.2351
BM10085
6.9886
BM10086
1.0282
Total number of rows:
328
Table truncated, full table size
4 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM274306.gpr.gz
54.8 Kb
(ftp)
(http)
GPR
Processed data included within Sample table
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