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GEO accession:
Sample GSM274276
Query DataSets for GSM274276
Status
Public on Dec 01, 2008
Title
miRNA Replicate 1 for CAL51 cell line
Sample type
other
Source name
Human cell line
Organism
Homo sapiens
Characteristics
No treatment. See ATCC/DSMZ for cell line details.
Extracted molecule
other
Extraction protocol
mirVana kit (Ambion)
Label
mirVana Kit (Ambion)
Label protocol
Asuragen Services
Hybridization protocol
Asuragen Services
Scan protocol
Asuragen Services
Description
Cell line, RPMI1640, 10 %FBS, 2mM L-glutamine, 10mM HEPES
Data processing
VSN / Only considered known human miRNAs with duplicate probes/experiments averaged
Submission date
Mar 14, 2008
Last update date
Mar 19, 2008
Contact name
Alex T. Adai
E-mail(s)
adai.alex@gene.com
Organization name
Genentech
Department
Oncology Diagnostics
Lab
David Dornan
Street address
X
City
X
State/province
X
ZIP/Postal code
X
Country
USA
Platform ID
GPL5106
Series (1)
GSE10833
miRNA Cancer Cell Line Profiles
Data table header descriptions
ID_REF
microRNA
VALUE
Log base 2 of signal intensity (VSN Normalized)
Data table
ID_REF
VALUE
BM10004
6.5403
BM10017
2.7464
BM10022
2.9654
BM10032
2.5015
BM10034
2.5015
BM10049
3.9
BM10050
13.18
BM10056
10.496
BM10057
8.8788
BM10063
1.4517
BM10065
1.1321
BM10067
8.5534
BM10070
2.6274
BM10071
1.4517
BM10073
2.9654
BM10081
0.82884
BM10083
3.5724
BM10084
3.9
BM10085
8.551
BM10086
0.30005
Total number of rows:
328
Table truncated, full table size
4 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM274276.gpr.gz
55.1 Kb
(ftp)
(http)
GPR
Processed data included within Sample table
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