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GEO accession:
Sample GSM274198
Query DataSets for GSM274198
Status
Public on Dec 01, 2008
Title
miRNA Replicate 1 for COLO206F cell line
Sample type
other
Source name
Human cell line
Organism
Homo sapiens
Characteristics
No treatment. See ATCC/DSMZ for cell line details.
Extracted molecule
other
Extraction protocol
mirVana kit (Ambion)
Label
mirVana Kit (Ambion)
Label protocol
Asuragen Services
Hybridization protocol
Asuragen Services
Scan protocol
Asuragen Services
Description
Cell line, RPMI1640, 10 %FBS, 2mM L-glutamine, 10mM HEPES
Data processing
VSN / Only considered known human miRNAs with duplicate probes/experiments averaged
Submission date
Mar 14, 2008
Last update date
Mar 19, 2008
Contact name
Alex T. Adai
E-mail(s)
adai.alex@gene.com
Organization name
Genentech
Department
Oncology Diagnostics
Lab
David Dornan
Street address
X
City
X
State/province
X
ZIP/Postal code
X
Country
USA
Platform ID
GPL5106
Series (1)
GSE10833
miRNA Cancer Cell Line Profiles
Data table header descriptions
ID_REF
microRNA
VALUE
Log base 2 of signal intensity (VSN Normalized)
Data table
ID_REF
VALUE
BM10004
11.44
BM10017
2.6558
BM10022
3.1264
BM10032
1.7494
BM10034
2.7501
BM10049
0.63987
BM10050
12.93
BM10056
11.442
BM10057
10.135
BM10063
4.2751
BM10065
1.6214
BM10067
8.7053
BM10070
1.4924
BM10071
0.98655
BM10073
3.7774
BM10081
0.58581
BM10083
1.9989
BM10084
2.5572
BM10085
8.9522
BM10086
2.4542
Total number of rows:
328
Table truncated, full table size
4 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM274198.gpr.gz
56.5 Kb
(ftp)
(http)
GPR
Processed data included within Sample table
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