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GEO accession:
Sample GSM274501
Query DataSets for GSM274501
Status
Public on Dec 01, 2008
Title
miRNA Replicate 2 for COLO205 cell line
Sample type
other
Source name
Human cell line
Organism
Homo sapiens
Characteristics
No treatment. See ATCC/DSMZ for cell line details.
Extracted molecule
other
Extraction protocol
mirVana kit (Ambion)
Label
mirVana Kit (Ambion)
Label protocol
Asuragen Services
Hybridization protocol
Asuragen Services
Scan protocol
Asuragen Services
Description
Cell line, RPMI1640, 10 %FBS, 2mM L-glutamine, 10mM HEPES
Data processing
VSN / Only considered known human miRNAs with duplicate probes/experiments averaged
Submission date
Mar 14, 2008
Last update date
Mar 19, 2008
Contact name
Alex T. Adai
E-mail(s)
adai.alex@gene.com
Organization name
Genentech
Department
Oncology Diagnostics
Lab
David Dornan
Street address
X
City
X
State/province
X
ZIP/Postal code
X
Country
USA
Platform ID
GPL5106
Series (1)
GSE10833
miRNA Cancer Cell Line Profiles
Data table header descriptions
ID_REF
microRNA
VALUE
Log base 2 of signal intensity (VSN Normalized)
Data table
ID_REF
VALUE
BM10004
12.285
BM10017
2.1149
BM10022
2.8864
BM10032
1.742
BM10034
3.0124
BM10049
2.289
BM10050
13.4
BM10056
11.216
BM10057
10.675
BM10063
5.8605
BM10065
2.6074
BM10067
8.7732
BM10070
4.0327
BM10071
1.742
BM10073
4.0651
BM10081
0.883
BM10083
3.4897
BM10084
2.5316
BM10085
8.5231
BM10086
0.46621
Total number of rows:
328
Table truncated, full table size
4 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM274501.gpr.gz
56.2 Kb
(ftp)
(http)
GPR
Processed data included within Sample table
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