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GEO accession:
Sample GSM274211
Query DataSets for GSM274211
Status
Public on Dec 01, 2008
Title
miRNA Replicate 1 for CL40 cell line
Sample type
other
Source name
Human cell line
Organism
Homo sapiens
Characteristics
No treatment. See ATCC/DSMZ for cell line details.
Extracted molecule
other
Extraction protocol
mirVana kit (Ambion)
Label
mirVana Kit (Ambion)
Label protocol
Asuragen Services
Hybridization protocol
Asuragen Services
Scan protocol
Asuragen Services
Description
Cell line, RPMI1640, 10 %FBS, 2mM L-glutamine, 10mM HEPES
Data processing
VSN / Only considered known human miRNAs with duplicate probes/experiments averaged
Submission date
Mar 14, 2008
Last update date
Mar 19, 2008
Contact name
Alex T. Adai
E-mail(s)
adai.alex@gene.com
Organization name
Genentech
Department
Oncology Diagnostics
Lab
David Dornan
Street address
X
City
X
State/province
X
ZIP/Postal code
X
Country
USA
Platform ID
GPL5106
Series (1)
GSE10833
miRNA Cancer Cell Line Profiles
Data table header descriptions
ID_REF
microRNA
VALUE
Log base 2 of signal intensity (VSN Normalized)
Data table
ID_REF
VALUE
BM10004
11.464
BM10017
-0.14526
BM10022
0.12725
BM10032
0.20196
BM10034
-0.63646
BM10049
3.8484
BM10050
12.648
BM10056
10.409
BM10057
8.7645
BM10063
4.2454
BM10065
3.2572
BM10067
7.0923
BM10070
2.5426
BM10071
-0.63646
BM10073
2.3651
BM10081
3.3154
BM10083
4.7749
BM10084
3.0697
BM10085
6.925
BM10086
0.20196
Total number of rows:
328
Table truncated, full table size
4 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM274211.gpr.gz
58.1 Kb
(ftp)
(http)
GPR
Processed data included within Sample table
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