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GEO accession:
Sample GSM274545
Query DataSets for GSM274545
Status
Public on Dec 01, 2008
Title
miRNA Replicate 2 for GRANTA519 cell line
Sample type
other
Source name
Human cell line
Organism
Homo sapiens
Characteristics
No treatment. See ATCC/DSMZ for cell line details.
Extracted molecule
other
Extraction protocol
mirVana kit (Ambion)
Label
mirVana Kit (Ambion)
Label protocol
Asuragen Services
Hybridization protocol
Asuragen Services
Scan protocol
Asuragen Services
Description
Cell line, RPMI1640, 10 %FBS, 2mM L-glutamine, 10mM HEPES
Data processing
VSN / Only considered known human miRNAs with duplicate probes/experiments averaged
Submission date
Mar 14, 2008
Last update date
Mar 19, 2008
Contact name
Alex T. Adai
E-mail(s)
adai.alex@gene.com
Organization name
Genentech
Department
Oncology Diagnostics
Lab
David Dornan
Street address
X
City
X
State/province
X
ZIP/Postal code
X
Country
USA
Platform ID
GPL5106
Series (1)
GSE10833
miRNA Cancer Cell Line Profiles
Data table header descriptions
ID_REF
microRNA
VALUE
Log base 2 of signal intensity (VSN Normalized)
Data table
ID_REF
VALUE
BM10004
6.365
BM10017
1.4828
BM10022
2.6865
BM10032
3.254
BM10034
3.4092
BM10049
4.2948
BM10050
12.744
BM10056
10.107
BM10057
9.6873
BM10063
2.9916
BM10065
1.3339
BM10067
9.9096
BM10070
5.1385
BM10071
2.8951
BM10073
2.2006
BM10081
0.18172
BM10083
3.0834
BM10084
1.7793
BM10085
7.8901
BM10086
3.5511
Total number of rows:
328
Table truncated, full table size
4 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM274545.gpr.gz
54.3 Kb
(ftp)
(http)
GPR
Processed data included within Sample table
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