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GEO accession:
Sample GSM274288
Query DataSets for GSM274288
Status
Public on Dec 01, 2008
Title
miRNA Replicate 1 for TOV112D cell line
Sample type
other
Source name
Human cell line
Organism
Homo sapiens
Characteristics
No treatment. See ATCC/DSMZ for cell line details.
Extracted molecule
other
Extraction protocol
mirVana kit (Ambion)
Label
mirVana Kit (Ambion)
Label protocol
Asuragen Services
Hybridization protocol
Asuragen Services
Scan protocol
Asuragen Services
Description
Cell line, RPMI1640, 10 %FBS, 2mM L-glutamine, 10mM HEPES
Data processing
VSN / Only considered known human miRNAs with duplicate probes/experiments averaged
Submission date
Mar 14, 2008
Last update date
Mar 19, 2008
Contact name
Alex T. Adai
E-mail(s)
adai.alex@gene.com
Organization name
Genentech
Department
Oncology Diagnostics
Lab
David Dornan
Street address
X
City
X
State/province
X
ZIP/Postal code
X
Country
USA
Platform ID
GPL5106
Series (1)
GSE10833
miRNA Cancer Cell Line Profiles
Data table header descriptions
ID_REF
microRNA
VALUE
Log base 2 of signal intensity (VSN Normalized)
Data table
ID_REF
VALUE
BM10004
6.6158
BM10017
1.7689
BM10022
4.5524
BM10032
2.8458
BM10034
2.1724
BM10049
3.7741
BM10050
12.643
BM10056
11.292
BM10057
9.382
BM10063
2.0947
BM10065
1.9345
BM10067
8.8949
BM10070
1.6847
BM10071
2.2482
BM10073
1.4292
BM10081
0.42258
BM10083
3.74
BM10084
2.5992
BM10085
9.0969
BM10086
3.2139
Total number of rows:
328
Table truncated, full table size
4 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM274288.gpr.gz
55.3 Kb
(ftp)
(http)
GPR
Processed data included within Sample table
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