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GEO accession:
Sample GSM274354
Query DataSets for GSM274354
Status
Public on Dec 01, 2008
Title
miRNA Replicate 1 for MDST8 cell line
Sample type
other
Source name
Human cell line
Organism
Homo sapiens
Characteristics
No treatment. See ATCC/DSMZ for cell line details.
Extracted molecule
other
Extraction protocol
mirVana kit (Ambion)
Label
mirVana Kit (Ambion)
Label protocol
Asuragen Services
Hybridization protocol
Asuragen Services
Scan protocol
Asuragen Services
Description
Cell line, RPMI1640, 10 %FBS, 2mM L-glutamine, 10mM HEPES
Data processing
VSN / Only considered known human miRNAs with duplicate probes/experiments averaged
Submission date
Mar 14, 2008
Last update date
Mar 19, 2008
Contact name
Alex T. Adai
E-mail(s)
adai.alex@gene.com
Organization name
Genentech
Department
Oncology Diagnostics
Lab
David Dornan
Street address
X
City
X
State/province
X
ZIP/Postal code
X
Country
USA
Platform ID
GPL5106
Series (1)
GSE10833
miRNA Cancer Cell Line Profiles
Data table header descriptions
ID_REF
microRNA
VALUE
Log base 2 of signal intensity (VSN Normalized)
Data table
ID_REF
VALUE
BM10004
6.3197
BM10017
1.4745
BM10022
4.3994
BM10032
3.4875
BM10034
1.6673
BM10049
3.7412
BM10050
12.866
BM10056
10.488
BM10057
7.9513
BM10063
0.57296
BM10065
2.4638
BM10067
7.499
BM10070
0.49454
BM10071
2.8908
BM10073
1.5711
BM10081
1.7629
BM10083
4.7389
BM10084
2.3841
BM10085
8.0097
BM10086
2.2174
Total number of rows:
328
Table truncated, full table size
4 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM274354.gpr.gz
55.2 Kb
(ftp)
(http)
GPR
Processed data included within Sample table
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