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GEO accession:
Sample GSM274419
Query DataSets for GSM274419
Status
Public on Dec 01, 2008
Title
miRNA Replicate 3 for BT474 cell line
Sample type
other
Source name
Human cell line
Organism
Homo sapiens
Characteristics
No treatment. See ATCC/DSMZ for cell line details.
Extracted molecule
other
Extraction protocol
mirVana kit (Ambion)
Label
mirVana Kit (Ambion)
Label protocol
Asuragen Services
Hybridization protocol
Asuragen Services
Scan protocol
Asuragen Services
Description
Cell line, RPMI1640, 10 %FBS, 2mM L-glutamine, 10mM HEPES
Data processing
VSN / Only considered known human miRNAs with duplicate probes/experiments averaged
Submission date
Mar 14, 2008
Last update date
Mar 19, 2008
Contact name
Alex T. Adai
E-mail(s)
adai.alex@gene.com
Organization name
Genentech
Department
Oncology Diagnostics
Lab
David Dornan
Street address
X
City
X
State/province
X
ZIP/Postal code
X
Country
USA
Platform ID
GPL5106
Series (1)
GSE10833
miRNA Cancer Cell Line Profiles
Data table header descriptions
ID_REF
microRNA
VALUE
Log base 2 of signal intensity (VSN Normalized)
Data table
ID_REF
VALUE
BM10004
6.9527
BM10017
2.5663
BM10022
2.8111
BM10032
2.7326
BM10034
3.7922
BM10049
3.2847
BM10050
12.786
BM10056
11.209
BM10057
7.4129
BM10063
5.3987
BM10065
0.61265
BM10067
8.4836
BM10070
1.9904
BM10071
3.1616
BM10073
1.3338
BM10081
3.2847
BM10083
3.2847
BM10084
4.2419
BM10085
7.2117
BM10086
3.0966
Total number of rows:
328
Table truncated, full table size
4 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM274419.gpr.gz
55.3 Kb
(ftp)
(http)
GPR
Processed data included within Sample table
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