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GEO accession:
Sample GSM274207
Query DataSets for GSM274207
Status
Public on Dec 01, 2008
Title
miRNA Replicate 1 for COLO741 cell line
Sample type
other
Source name
Human cell line
Organism
Homo sapiens
Characteristics
No treatment. See ATCC/DSMZ for cell line details.
Extracted molecule
other
Extraction protocol
mirVana kit (Ambion)
Label
mirVana Kit (Ambion)
Label protocol
Asuragen Services
Hybridization protocol
Asuragen Services
Scan protocol
Asuragen Services
Description
Cell line, RPMI1640, 10 %FBS, 2mM L-glutamine, 10mM HEPES
Data processing
VSN / Only considered known human miRNAs with duplicate probes/experiments averaged
Submission date
Mar 14, 2008
Last update date
Mar 19, 2008
Contact name
Alex T. Adai
E-mail(s)
adai.alex@gene.com
Organization name
Genentech
Department
Oncology Diagnostics
Lab
David Dornan
Street address
X
City
X
State/province
X
ZIP/Postal code
X
Country
USA
Platform ID
GPL5106
Series (1)
GSE10833
miRNA Cancer Cell Line Profiles
Data table header descriptions
ID_REF
microRNA
VALUE
Log base 2 of signal intensity (VSN Normalized)
Data table
ID_REF
VALUE
BM10004
6.4698
BM10017
0.95841
BM10022
0.82316
BM10032
1.6827
BM10034
2.2401
BM10049
3.689
BM10050
12.008
BM10056
10.856
BM10057
9.5184
BM10063
3.0122
BM10065
1.3883
BM10067
9.2697
BM10070
2.6042
BM10071
0.69321
BM10073
2.4886
BM10081
3.864
BM10083
2.3672
BM10084
2.8186
BM10085
7.5139
BM10086
1.8278
Total number of rows:
328
Table truncated, full table size
4 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM274207.gpr.gz
55.9 Kb
(ftp)
(http)
GPR
Processed data included within Sample table
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