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GEO accession:
Sample GSM274399
Query DataSets for GSM274399
Status
Public on Dec 01, 2008
Title
miRNA Replicate 1 for A427 cell line
Sample type
other
Source name
Human cell line
Organism
Homo sapiens
Characteristics
No treatment. See ATCC/DSMZ for cell line details.
Extracted molecule
other
Extraction protocol
mirVana kit (Ambion)
Label
mirVana Kit (Ambion)
Label protocol
Asuragen Services
Hybridization protocol
Asuragen Services
Scan protocol
Asuragen Services
Description
Cell line, RPMI1640, 10 %FBS, 2mM L-glutamine, 10mM HEPES
Data processing
VSN / Only considered known human miRNAs with duplicate probes/experiments averaged
Submission date
Mar 14, 2008
Last update date
Mar 19, 2008
Contact name
Alex T. Adai
E-mail(s)
adai.alex@gene.com
Organization name
Genentech
Department
Oncology Diagnostics
Lab
David Dornan
Street address
X
City
X
State/province
X
ZIP/Postal code
X
Country
USA
Platform ID
GPL5106
Series (1)
GSE10833
miRNA Cancer Cell Line Profiles
Data table header descriptions
ID_REF
microRNA
VALUE
Log base 2 of signal intensity (VSN Normalized)
Data table
ID_REF
VALUE
BM10004
6.237
BM10017
2.0836
BM10022
3.3765
BM10032
2.3196
BM10034
1.2188
BM10049
3.7364
BM10050
13.106
BM10056
11.539
BM10057
9.6515
BM10063
4.0877
BM10065
1.5701
BM10067
9.8805
BM10070
2.6722
BM10071
1.0479
BM10073
2.1642
BM10081
1.6581
BM10083
4.2241
BM10084
3.0846
BM10085
8.5855
BM10086
1.6581
Total number of rows:
328
Table truncated, full table size
4 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM274399.gpr.gz
55.5 Kb
(ftp)
(http)
GPR
Processed data included within Sample table
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