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GEO accession:
Sample GSM274289
Query DataSets for GSM274289
Status
Public on Dec 01, 2008
Title
miRNA Replicate 1 for COLO704 cell line
Sample type
other
Source name
Human cell line
Organism
Homo sapiens
Characteristics
No treatment. See ATCC/DSMZ for cell line details.
Extracted molecule
other
Extraction protocol
mirVana kit (Ambion)
Label
mirVana Kit (Ambion)
Label protocol
Asuragen Services
Hybridization protocol
Asuragen Services
Scan protocol
Asuragen Services
Description
Cell line, RPMI1640, 10 %FBS, 2mM L-glutamine, 10mM HEPES
Data processing
VSN / Only considered known human miRNAs with duplicate probes/experiments averaged
Submission date
Mar 14, 2008
Last update date
Mar 19, 2008
Contact name
Alex T. Adai
E-mail(s)
adai.alex@gene.com
Organization name
Genentech
Department
Oncology Diagnostics
Lab
David Dornan
Street address
X
City
X
State/province
X
ZIP/Postal code
X
Country
USA
Platform ID
GPL5106
Series (1)
GSE10833
miRNA Cancer Cell Line Profiles
Data table header descriptions
ID_REF
microRNA
VALUE
Log base 2 of signal intensity (VSN Normalized)
Data table
ID_REF
VALUE
BM10004
7.1413
BM10017
1.825
BM10022
4.512
BM10032
2.8792
BM10034
1.5098
BM10049
1.747
BM10050
12.916
BM10056
12.295
BM10057
10.674
BM10063
5.7484
BM10065
0.74898
BM10067
9.9109
BM10070
0.48283
BM10071
1.9779
BM10073
3.4651
BM10081
1.5892
BM10083
3.3869
BM10084
3.7767
BM10085
8.8466
BM10086
1.4303
Total number of rows:
328
Table truncated, full table size
4 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM274289.gpr.gz
55.8 Kb
(ftp)
(http)
GPR
Processed data included within Sample table
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