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GEO accession:
Sample GSM274418
Query DataSets for GSM274418
Status
Public on Dec 01, 2008
Title
miRNA Replicate 3 for CACO2 cell line
Sample type
other
Source name
Human cell line
Organism
Homo sapiens
Characteristics
No treatment. See ATCC/DSMZ for cell line details.
Extracted molecule
other
Extraction protocol
mirVana kit (Ambion)
Label
mirVana Kit (Ambion)
Label protocol
Asuragen Services
Hybridization protocol
Asuragen Services
Scan protocol
Asuragen Services
Description
Cell line, RPMI1640, 10 %FBS, 2mM L-glutamine, 10mM HEPES
Data processing
VSN / Only considered known human miRNAs with duplicate probes/experiments averaged
Submission date
Mar 14, 2008
Last update date
Mar 19, 2008
Contact name
Alex T. Adai
E-mail(s)
adai.alex@gene.com
Organization name
Genentech
Department
Oncology Diagnostics
Lab
David Dornan
Street address
X
City
X
State/province
X
ZIP/Postal code
X
Country
USA
Platform ID
GPL5106
Series (1)
GSE10833
miRNA Cancer Cell Line Profiles
Data table header descriptions
ID_REF
microRNA
VALUE
Log base 2 of signal intensity (VSN Normalized)
Data table
ID_REF
VALUE
BM10004
9.5366
BM10017
0.69914
BM10022
4.1797
BM10032
3.7721
BM10034
3.1476
BM10049
2.8171
BM10050
8.1433
BM10056
8.606
BM10057
7.367
BM10063
3.9202
BM10065
2.0785
BM10067
6.3796
BM10070
2.6282
BM10071
2.6282
BM10073
2.7248
BM10081
-0.14121
BM10083
5.0114
BM10084
3.3608
BM10085
5.9851
BM10086
4.2945
Total number of rows:
328
Table truncated, full table size
4 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM274418.gpr.gz
53.6 Kb
(ftp)
(http)
GPR
Processed data included within Sample table
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