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GEO accession:
Sample GSM274273
Query DataSets for GSM274273
Status
Public on Dec 01, 2008
Title
miRNA Replicate 1 for CAL120 cell line
Sample type
other
Source name
Human cell line
Organism
Homo sapiens
Characteristics
No treatment. See ATCC/DSMZ for cell line details.
Extracted molecule
other
Extraction protocol
mirVana kit (Ambion)
Label
mirVana Kit (Ambion)
Label protocol
Asuragen Services
Hybridization protocol
Asuragen Services
Scan protocol
Asuragen Services
Description
Cell line, RPMI1640, 10 %FBS, 2mM L-glutamine, 10mM HEPES
Data processing
VSN / Only considered known human miRNAs with duplicate probes/experiments averaged
Submission date
Mar 14, 2008
Last update date
Mar 19, 2008
Contact name
Alex T. Adai
E-mail(s)
adai.alex@gene.com
Organization name
Genentech
Department
Oncology Diagnostics
Lab
David Dornan
Street address
X
City
X
State/province
X
ZIP/Postal code
X
Country
USA
Platform ID
GPL5106
Series (1)
GSE10833
miRNA Cancer Cell Line Profiles
Data table header descriptions
ID_REF
microRNA
VALUE
Log base 2 of signal intensity (VSN Normalized)
Data table
ID_REF
VALUE
BM10004
6.6564
BM10017
-0.26212
BM10022
4.3757
BM10032
4.2266
BM10034
0.879
BM10049
4.1735
BM10050
12.434
BM10056
8.293
BM10057
8.1699
BM10063
4.8565
BM10065
0.29607
BM10067
7.8614
BM10070
0.879
BM10071
3.8086
BM10073
2.3939
BM10081
4.0018
BM10083
1.7435
BM10084
3.6651
BM10085
6.3484
BM10086
3.4223
Total number of rows:
328
Table truncated, full table size
4 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM274273.gpr.gz
54.5 Kb
(ftp)
(http)
GPR
Processed data included within Sample table
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