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GEO accession:
Sample GSM274586
Query DataSets for GSM274586
Status
Public on Dec 01, 2008
Title
miRNA Replicate 3 for HOP92 cell line
Sample type
other
Source name
Human cell line
Organism
Homo sapiens
Characteristics
No treatment. See ATCC/DSMZ for cell line details.
Extracted molecule
other
Extraction protocol
mirVana kit (Ambion)
Label
mirVana Kit (Ambion)
Label protocol
Asuragen Services
Hybridization protocol
Asuragen Services
Scan protocol
Asuragen Services
Description
Cell line, RPMI1640, 10 %FBS, 2mM L-glutamine, 10mM HEPES
Data processing
VSN / Only considered known human miRNAs with duplicate probes/experiments averaged
Submission date
Mar 14, 2008
Last update date
Mar 19, 2008
Contact name
Alex T. Adai
E-mail(s)
adai.alex@gene.com
Organization name
Genentech
Department
Oncology Diagnostics
Lab
David Dornan
Street address
X
City
X
State/province
X
ZIP/Postal code
X
Country
USA
Platform ID
GPL5106
Series (1)
GSE10833
miRNA Cancer Cell Line Profiles
Data table header descriptions
ID_REF
microRNA
VALUE
Log base 2 of signal intensity (VSN Normalized)
Data table
ID_REF
VALUE
BM10004
6.3603
BM10017
4.5723
BM10022
3.7575
BM10032
3.1424
BM10034
3.2151
BM10049
1.7306
BM10050
13.859
BM10056
9.4256
BM10057
9.0577
BM10063
6.9272
BM10065
2.325
BM10067
9.2397
BM10070
3.0665
BM10071
2.6337
BM10073
1.7306
BM10081
0.14763
BM10083
2.9874
BM10084
2.4322
BM10085
8.1135
BM10086
2.9047
Total number of rows:
328
Table truncated, full table size
4 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM274586.gpr.gz
55.2 Kb
(ftp)
(http)
GPR
Processed data included within Sample table
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