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GEO accession:
Sample GSM274423
Query DataSets for GSM274423
Status
Public on Dec 01, 2008
Title
miRNA Replicate 2 for BT549 cell line
Sample type
other
Source name
Human cell line
Organism
Homo sapiens
Characteristics
No treatment. See ATCC/DSMZ for cell line details.
Extracted molecule
other
Extraction protocol
mirVana kit (Ambion)
Label
mirVana Kit (Ambion)
Label protocol
Asuragen Services
Hybridization protocol
Asuragen Services
Scan protocol
Asuragen Services
Description
Cell line, RPMI1640, 10 %FBS, 2mM L-glutamine, 10mM HEPES
Data processing
VSN / Only considered known human miRNAs with duplicate probes/experiments averaged
Submission date
Mar 14, 2008
Last update date
Mar 19, 2008
Contact name
Alex T. Adai
E-mail(s)
adai.alex@gene.com
Organization name
Genentech
Department
Oncology Diagnostics
Lab
David Dornan
Street address
X
City
X
State/province
X
ZIP/Postal code
X
Country
USA
Platform ID
GPL5106
Series (1)
GSE10833
miRNA Cancer Cell Line Profiles
Data table header descriptions
ID_REF
microRNA
VALUE
Log base 2 of signal intensity (VSN Normalized)
Data table
ID_REF
VALUE
BM10004
6.1176
BM10017
2.9064
BM10022
4.5637
BM10032
2.9828
BM10034
2.1717
BM10049
3.553
BM10050
13.233
BM10056
10.973
BM10057
8.837
BM10063
3.8013
BM10065
1.4881
BM10067
8.399
BM10070
1.2532
BM10071
2.1717
BM10073
2.7441
BM10081
2.7441
BM10083
3.6058
BM10084
3.8013
BM10085
7.779
BM10086
1.0245
Total number of rows:
328
Table truncated, full table size
4 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM274423.gpr.gz
56.3 Kb
(ftp)
(http)
GPR
Processed data included within Sample table
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