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GEO accession:
Sample GSM274241
Query DataSets for GSM274241
Status
Public on Dec 01, 2008
Title
miRNA Replicate 1 for MDAMB231 cell line
Sample type
other
Source name
Human cell line
Organism
Homo sapiens
Characteristics
No treatment. See ATCC/DSMZ for cell line details.
Extracted molecule
other
Extraction protocol
mirVana kit (Ambion)
Label
mirVana Kit (Ambion)
Label protocol
Asuragen Services
Hybridization protocol
Asuragen Services
Scan protocol
Asuragen Services
Description
Cell line, RPMI1640, 10 %FBS, 2mM L-glutamine, 10mM HEPES
Data processing
VSN / Only considered known human miRNAs with duplicate probes/experiments averaged
Submission date
Mar 14, 2008
Last update date
Mar 19, 2008
Contact name
Alex T. Adai
E-mail(s)
adai.alex@gene.com
Organization name
Genentech
Department
Oncology Diagnostics
Lab
David Dornan
Street address
X
City
X
State/province
X
ZIP/Postal code
X
Country
USA
Platform ID
GPL5106
Series (1)
GSE10833
miRNA Cancer Cell Line Profiles
Data table header descriptions
ID_REF
microRNA
VALUE
Log base 2 of signal intensity (VSN Normalized)
Data table
ID_REF
VALUE
BM10004
5.7283
BM10017
2.7099
BM10022
1.8725
BM10032
3.0383
BM10034
2.7973
BM10049
1.9897
BM10050
13.814
BM10056
10.598
BM10057
8.8107
BM10063
2.4247
BM10065
1.5089
BM10067
8.1466
BM10070
3.1122
BM10071
1.7528
BM10073
1.8725
BM10081
2.7973
BM10083
2.2147
BM10084
3.3801
BM10085
7.1619
BM10086
3.4996
Total number of rows:
328
Table truncated, full table size
4 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM274241.gpr.gz
55.9 Kb
(ftp)
(http)
GPR
Processed data included within Sample table
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