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GEO accession:
Sample GSM274376
Query DataSets for GSM274376
Status
Public on Dec 01, 2008
Title
miRNA Replicate 2 for VMRCLCD cell line
Sample type
other
Source name
Human cell line
Organism
Homo sapiens
Characteristics
No treatment. See ATCC/DSMZ for cell line details.
Extracted molecule
other
Extraction protocol
mirVana kit (Ambion)
Label
mirVana Kit (Ambion)
Label protocol
Asuragen Services
Hybridization protocol
Asuragen Services
Scan protocol
Asuragen Services
Description
Cell line, RPMI1640, 10 %FBS, 2mM L-glutamine, 10mM HEPES
Data processing
VSN / Only considered known human miRNAs with duplicate probes/experiments averaged
Submission date
Mar 14, 2008
Last update date
Mar 19, 2008
Contact name
Alex T. Adai
E-mail(s)
adai.alex@gene.com
Organization name
Genentech
Department
Oncology Diagnostics
Lab
David Dornan
Street address
X
City
X
State/province
X
ZIP/Postal code
X
Country
USA
Platform ID
GPL5106
Series (1)
GSE10833
miRNA Cancer Cell Line Profiles
Data table header descriptions
ID_REF
microRNA
VALUE
Log base 2 of signal intensity (VSN Normalized)
Data table
ID_REF
VALUE
BM10004
9.3725
BM10017
2.8682
BM10022
3.4572
BM10032
2.6623
BM10034
1.149
BM10049
2.4874
BM10050
10.651
BM10056
11.636
BM10057
9.5607
BM10063
7.0556
BM10065
1.5331
BM10067
10.37
BM10070
2.6381
BM10071
2.4613
BM10073
1.149
BM10081
1.8838
BM10083
4.3052
BM10084
2.2708
BM10085
8.6372
BM10086
3.5482
Total number of rows:
328
Table truncated, full table size
4 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM274376.gpr.gz
60.4 Kb
(ftp)
(http)
GPR
Processed data included within Sample table
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