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GEO accession:
Sample GSM274263
Query DataSets for GSM274263
Status
Public on Dec 01, 2008
Title
miRNA Replicate 1 for MALME3M cell line
Sample type
other
Source name
Human cell line
Organism
Homo sapiens
Characteristics
No treatment. See ATCC/DSMZ for cell line details.
Extracted molecule
other
Extraction protocol
mirVana kit (Ambion)
Label
mirVana Kit (Ambion)
Label protocol
Asuragen Services
Hybridization protocol
Asuragen Services
Scan protocol
Asuragen Services
Description
Cell line, RPMI1640, 10 %FBS, 2mM L-glutamine, 10mM HEPES
Data processing
VSN / Only considered known human miRNAs with duplicate probes/experiments averaged
Submission date
Mar 14, 2008
Last update date
Mar 19, 2008
Contact name
Alex T. Adai
E-mail(s)
adai.alex@gene.com
Organization name
Genentech
Department
Oncology Diagnostics
Lab
David Dornan
Street address
X
City
X
State/province
X
ZIP/Postal code
X
Country
USA
Platform ID
GPL5106
Series (1)
GSE10833
miRNA Cancer Cell Line Profiles
Data table header descriptions
ID_REF
microRNA
VALUE
Log base 2 of signal intensity (VSN Normalized)
Data table
ID_REF
VALUE
BM10004
10.937
BM10017
2.2578
BM10022
3.3232
BM10032
2.2578
BM10034
1.8236
BM10049
2.9628
BM10050
12.626
BM10056
11.084
BM10057
9.4094
BM10063
3.1965
BM10065
2.1184
BM10067
7.158
BM10070
1.3596
BM10071
-0.13583
BM10073
1.6703
BM10081
3.4027
BM10083
4.0873
BM10084
3.8713
BM10085
7.9452
BM10086
2.391
Total number of rows:
328
Table truncated, full table size
4 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM274263.gpr.gz
54.3 Kb
(ftp)
(http)
GPR
Processed data included within Sample table
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