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GEO accession:
Sample GSM274594
Query DataSets for GSM274594
Status
Public on Dec 01, 2008
Title
miRNA Replicate 1 for DB cell line
Sample type
other
Source name
Human cell line
Organism
Homo sapiens
Characteristics
No treatment. See ATCC/DSMZ for cell line details.
Extracted molecule
other
Extraction protocol
mirVana kit (Ambion)
Label
mirVana Kit (Ambion)
Label protocol
Asuragen Services
Hybridization protocol
Asuragen Services
Scan protocol
Asuragen Services
Description
Cell line, RPMI1640, 10 %FBS, 2mM L-glutamine, 10mM HEPES
Data processing
VSN / Only considered known human miRNAs with duplicate probes/experiments averaged
Submission date
Mar 14, 2008
Last update date
Mar 19, 2008
Contact name
Alex T. Adai
E-mail(s)
adai.alex@gene.com
Organization name
Genentech
Department
Oncology Diagnostics
Lab
David Dornan
Street address
X
City
X
State/province
X
ZIP/Postal code
X
Country
USA
Platform ID
GPL5106
Series (1)
GSE10833
miRNA Cancer Cell Line Profiles
Data table header descriptions
ID_REF
microRNA
VALUE
Log base 2 of signal intensity (VSN Normalized)
Data table
ID_REF
VALUE
BM10004
6.2333
BM10017
2.1501
BM10022
-0.69761
BM10032
-1.7375
BM10034
2.5149
BM10049
3.7349
BM10050
9.8476
BM10056
10.14
BM10057
9.7639
BM10063
1.9846
BM10065
1.8127
BM10067
7.9195
BM10070
1.7426
BM10071
-0.0049783
BM10073
2.3987
BM10081
-0.47445
BM10083
3.4841
BM10084
4.4251
BM10085
7.3713
BM10086
1.8821
Total number of rows:
328
Table truncated, full table size
4 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM274594.gpr.gz
56.6 Kb
(ftp)
(http)
GPR
Processed data included within Sample table
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