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GEO accession:
Sample GSM274282
Query DataSets for GSM274282
Status
Public on Dec 01, 2008
Title
miRNA Replicate 1 for HCC1599 cell line
Sample type
other
Source name
Human cell line
Organism
Homo sapiens
Characteristics
No treatment. See ATCC/DSMZ for cell line details.
Extracted molecule
other
Extraction protocol
mirVana kit (Ambion)
Label
mirVana Kit (Ambion)
Label protocol
Asuragen Services
Hybridization protocol
Asuragen Services
Scan protocol
Asuragen Services
Description
Cell line, RPMI1640, 10 %FBS, 2mM L-glutamine, 10mM HEPES
Data processing
VSN / Only considered known human miRNAs with duplicate probes/experiments averaged
Submission date
Mar 14, 2008
Last update date
Mar 19, 2008
Contact name
Alex T. Adai
E-mail(s)
adai.alex@gene.com
Organization name
Genentech
Department
Oncology Diagnostics
Lab
David Dornan
Street address
X
City
X
State/province
X
ZIP/Postal code
X
Country
USA
Platform ID
GPL5106
Series (1)
GSE10833
miRNA Cancer Cell Line Profiles
Data table header descriptions
ID_REF
microRNA
VALUE
Log base 2 of signal intensity (VSN Normalized)
Data table
ID_REF
VALUE
BM10004
6.9903
BM10017
2.2749
BM10022
3.4473
BM10032
3.6632
BM10034
1.5994
BM10049
3.3885
BM10050
14.323
BM10056
11.454
BM10057
10.011
BM10063
1.4806
BM10065
1.0142
BM10067
9.4308
BM10070
1.128
BM10071
1.5994
BM10073
2.5687
BM10081
3.7612
BM10083
2.9861
BM10084
0.59062
BM10085
8.5395
BM10086
1.9488
Total number of rows:
328
Table truncated, full table size
4 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM274282.gpr.gz
57.0 Kb
(ftp)
(http)
GPR
Processed data included within Sample table
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