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GEO accession:
Sample GSM274210
Query DataSets for GSM274210
Status
Public on Dec 01, 2008
Title
miRNA Replicate 1 for COLO678 cell line
Sample type
other
Source name
Human cell line
Organism
Homo sapiens
Characteristics
No treatment. See ATCC/DSMZ for cell line details.
Extracted molecule
other
Extraction protocol
mirVana kit (Ambion)
Label
mirVana Kit (Ambion)
Label protocol
Asuragen Services
Hybridization protocol
Asuragen Services
Scan protocol
Asuragen Services
Description
Cell line, RPMI1640, 10 %FBS, 2mM L-glutamine, 10mM HEPES
Data processing
VSN / Only considered known human miRNAs with duplicate probes/experiments averaged
Submission date
Mar 14, 2008
Last update date
Mar 19, 2008
Contact name
Alex T. Adai
E-mail(s)
adai.alex@gene.com
Organization name
Genentech
Department
Oncology Diagnostics
Lab
David Dornan
Street address
X
City
X
State/province
X
ZIP/Postal code
X
Country
USA
Platform ID
GPL5106
Series (1)
GSE10833
miRNA Cancer Cell Line Profiles
Data table header descriptions
ID_REF
microRNA
VALUE
Log base 2 of signal intensity (VSN Normalized)
Data table
ID_REF
VALUE
BM10004
5.3805
BM10017
2.9176
BM10022
2.1636
BM10032
2.1636
BM10034
3.2646
BM10049
1.7016
BM10050
13.245
BM10056
10.86
BM10057
9.0588
BM10063
4.4879
BM10065
2.4155
BM10067
7.7597
BM10070
2.1636
BM10071
2.334
BM10073
3.0994
BM10081
1.2189
BM10083
3.4153
BM10084
3.1562
BM10085
8.0845
BM10086
3.4153
Total number of rows:
328
Table truncated, full table size
4 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM274210.gpr.gz
59.5 Kb
(ftp)
(http)
GPR
Processed data included within Sample table
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