|
| Status |
Public on Dec 28, 2013 |
| Title |
Genome-wide parent-of-origin DNA methylation analysis [Methylation450 BeadChip] |
| Organism |
Homo sapiens |
| Experiment type |
Methylation profiling by genome tiling array
|
| Summary |
Genomic imprinting is a form of epigenetic regulation that results in expression of either the maternally or paternally inherited allele of a subset of genes. Imprinted loci contain differentially methylated regions (DMRs) where cytosine methylation marks one of the parental alleles, providing cis-acting regulatory elements that influence the allelic expression of surrounding genes, however to date the total number of imprinted loci within the human genome is unknown. To characterize known imprinted DMRS and identify novel imprinted loci we have performed whole-genome bisulphite sequencing and high-resolution DNA methylation array analysis of healthy tissues.
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| |
|
| Overall design |
Sequencing of bisulfite converted DNA and array based analysis of normal tissues, human embryonic stem cells, androgenetic hydatidiform moles and leukocytes from reciprocal genome-wide uniparental disomies.
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| |
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| Contributor(s) |
Monk D, Nakabayashi K, Esteller M |
| Citation(s) |
24402520, 26544189 |
| Submission date |
Nov 20, 2013 |
| Last update date |
Mar 22, 2019 |
| Contact name |
Manel Esteller |
| Organization name |
IDIBELL
|
| Department |
PEBC
|
| Lab |
Cancer Epigenetics
|
| Street address |
Hospital Duran i Reynals Av. Gran Via s/n km, 2.7
|
| City |
L'Hospitalet de Llobregat |
| State/province |
Barcelona |
| ZIP/Postal code |
08908 |
| Country |
Spain |
| |
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| Platforms (1) |
| GPL13534 |
Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482) |
|
| Samples (28)
|
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| This SubSeries is part of SuperSeries: |
| GSE52578 |
Genome-wide parent-of-origin DNA methylation analysis |
|
| Relations |
| BioProject |
PRJNA229408 |
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