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Status
Public on Jul 07, 2009
Title
Agilent-015354 Bovine Oligo Microarray (4x44K) (Feature Number version)
Technology type
in situ oligonucleotide
Distribution
custom-commercial
Organism
Bos taurus Manufacturer
Agilent Technologies
Manufacture protocol
see manufacturer's web site at http://www.agilent.com/
Catalog number
G2514F
Description
Submission date
Jul 15, 2008
Last update date
Dec 06, 2012
Organization
Agilent Technologies
E-mail(s)
cag_sales-na@agilent.com Phone
877-424-4536
URL
http://www.agilent.com Department
Street address
City
Palo Alto
State/province
CA
ZIP/Postal code
94304
Country
USA
Samples (410)
GSM306490 , GSM306491 , GSM306492 , GSM306494 , GSM306495 , GSM306497
GSM306498 ,
GSM306500 ,
GSM306501 ,
GSM306504 ,
GSM306543 ,
GSM306544 ,
GSM306545 ,
GSM306547 ,
GSM306595 ,
GSM306597 ,
GSM306599 ,
GSM306604 ,
GSM306624 ,
GSM306626 ,
GSM506585 ,
GSM506586 ,
GSM506587 ,
GSM506588 ,
GSM506589 ,
GSM506590 ,
GSM506591 ,
GSM506592 ,
GSM506593 ,
GSM506594 ,
GSM506595 ,
GSM506596 ,
GSM506597 ,
GSM506598 ,
GSM506599 ,
GSM506600 ,
GSM538886 ,
GSM538887 ,
GSM538888 ,
GSM538889 ,
GSM538890 ,
GSM538891 ,
GSM538892 ,
GSM538893 ,
GSM538894 ,
GSM538895 ,
GSM538896 ,
GSM538897 ,
GSM538898 ,
GSM538899 ,
GSM538900 ,
GSM538901 ,
GSM538902 ,
GSM538903 ,
GSM538904 ,
GSM538905 ,
GSM592247 ,
GSM592248 ,
GSM592249 ,
GSM592250 ,
GSM592251 ,
GSM592252 ,
GSM628113 ,
GSM628114 ,
GSM628115 ,
GSM628116 ,
GSM628117 ,
GSM628118 ,
GSM628119 ,
GSM628120 ,
GSM628121 ,
GSM628122 ,
GSM628123 ,
GSM628124 ,
GSM628125 ,
GSM628126 ,
GSM628127 ,
GSM628128 ,
GSM628129 ,
GSM628130 ,
GSM628131 ,
GSM628132 ,
GSM628133 ,
GSM628134 ,
GSM628135 ,
GSM628136 ,
GSM628137 ,
GSM628138 ,
GSM628139 ,
GSM628140 ,
GSM628141 ,
GSM628142 ,
GSM628143 ,
GSM628144 ,
GSM628145 ,
GSM628146 ,
GSM628147 ,
GSM628148 ,
GSM628149 ,
GSM628150 ,
GSM628151 ,
GSM628152 ,
GSM628153 ,
GSM628154 ,
GSM628155 ,
GSM628156 ,
GSM628157 ,
GSM628158 ,
GSM628159 ,
GSM628160 ,
GSM646266 ,
GSM646267 ,
GSM646268 ,
GSM646269 ,
GSM646270 ,
GSM646271 ,
GSM646272 ,
GSM646273 ,
GSM646274 ,
GSM646275 ,
GSM646276 ,
GSM646277 ,
GSM646278 ,
GSM646279 ,
GSM646280 ,
GSM646281 ,
GSM646282 ,
GSM646283 ,
GSM646284 ,
GSM646285 ,
GSM646286 ,
GSM646287 ,
GSM646288 ,
GSM646289 ,
GSM646290 ,
GSM646291 ,
GSM646292 ,
GSM646293 ,
GSM646294 ,
GSM646295 ,
GSM646296 ,
GSM646297 ,
GSM646298 ,
GSM646299 ,
GSM646300 ,
GSM646301 ,
GSM646302 ,
GSM646303 ,
GSM646304 ,
GSM646305 ,
GSM646306 ,
GSM646307 ,
GSM646308 ,
GSM1004086 ,
GSM1004087 ,
GSM1004088 ,
GSM1004089 ,
GSM1004090 ,
GSM1004091 ,
GSM1004092 ,
GSM1004093 ,
GSM1004094 ,
GSM1004095 ,
GSM1004096 ,
GSM1004097 ,
GSM1004098 ,
GSM1004099 ,
GSM1004100 ,
GSM1129882 ,
GSM1129883 ,
GSM1129884 ,
GSM1129885 ,
GSM1129886 ,
GSM1129887 ,
GSM1129888 ,
GSM1129889 ,
GSM1160063 ,
GSM1160064 ,
GSM1160065 ,
GSM1160066 ,
GSM1160067 ,
GSM1160068 ,
GSM1160069 ,
GSM1160070 ,
GSM1160071 ,
GSM1160072 ,
GSM1160073 ,
GSM1160074 ,
GSM1160075 ,
GSM1160076 ,
GSM1160077 ,
GSM1160078 ,
GSM1160079 ,
GSM1160080 ,
GSM1160081 ,
GSM1160082 ,
GSM1160083 ,
GSM1160084 ,
GSM1160085 ,
GSM1160086 ,
GSM1160087 ,
GSM1160088 ,
GSM1160089 ,
GSM1160090 ,
GSM1160091 ,
GSM1160092 ,
GSM1160093 ,
GSM1160094 ,
GSM1160095 ,
GSM1160096 ,
GSM1160097 ,
GSM1160098 ,
GSM1160099 ,
GSM1213031 ,
GSM1213032 ,
GSM1213033 ,
GSM1213034 ,
GSM1213035 ,
GSM1213036 ,
GSM1213037 ,
GSM1213038 ,
GSM1213039 ,
GSM1213040 ,
GSM1213041 ,
GSM1213042 ,
GSM1213043 ,
GSM1213044 ,
GSM1213045 ,
GSM1213046 ,
GSM1213047 ,
GSM1213048 ,
GSM1213049 ,
GSM1213050 ,
GSM1213051 ,
GSM1213052 ,
GSM1213053 ,
GSM1228052 ,
GSM1228053 ,
GSM1228054 ,
GSM1228055 ,
GSM1228056 ,
GSM1228057 ,
GSM1228058 ,
GSM1228059 ,
GSM1228060 ,
GSM1228061 ,
GSM1228062 ,
GSM1228063 ,
GSM1228064 ,
GSM1228065 ,
GSM1228066 ,
GSM1228067 ,
GSM1228068 ,
GSM1228069 ,
GSM1228070 ,
GSM1228071 ,
GSM1228072 ,
GSM1228073 ,
GSM1228074 ,
GSM1228075 ,
GSM1228076 ,
GSM1228077 ,
GSM1228078 ,
GSM1228079 ,
GSM1228080 ,
GSM1228081 ,
GSM1275878 ,
GSM1275879 ,
GSM1275880 ,
GSM1275881 ,
GSM1275882 ,
GSM1275883 ,
GSM1275884 ,
GSM1275885 ,
GSM1275886 ,
GSM1275887 ,
GSM1275888 ,
GSM1275889 ,
GSM1275890 ,
GSM1275891 ,
GSM1275892 ,
GSM1275893 ,
GSM1275894 ,
GSM1275895 ,
GSM1275896 ,
GSM1275897 ,
GSM1275898 ,
GSM1275899 ,
GSM1275900 ,
GSM1275901 ,
GSM1275902 ,
GSM1275903 ,
GSM1275904 ,
GSM1275905 ,
GSM1275906 ,
GSM1275907 ,
GSM1275908 ,
GSM1275909 ,
GSM1275910 ,
GSM1275911 ,
GSM1275912 ,
GSM1275913 ,
GSM1275914 ,
GSM1275915 ,
GSM1275916 ,
GSM1275917 ,
GSM1277470 ,
GSM1277471 ,
GSM1277472 ,
GSM1277473 ,
GSM1277474 ,
GSM1277475 ,
GSM1277476 ,
GSM1277477 ,
GSM1277478 ,
GSM1277479 ,
GSM1277480 ,
GSM1277481 ,
GSM1277482 ,
GSM1277483 ,
GSM1277484 ,
GSM1277485 ,
GSM1277486 ,
GSM1277487 ,
GSM1277488 ,
GSM1277489 ,
GSM1517436 ,
GSM1517437 ,
GSM1517438 ,
GSM1517439 ,
GSM1517440 ,
GSM1517441 ,
GSM1517442 ,
GSM1517443 ,
GSM1517444 ,
GSM1517445 ,
GSM1517446 ,
GSM1517447 ,
GSM1518119 ,
GSM1518120 ,
GSM1518121 ,
GSM1518122 ,
GSM1518123 ,
GSM1518124 ,
GSM1518125 ,
GSM1518126 ,
GSM1518127 ,
GSM1518128 ,
GSM1518129 ,
GSM1518130 ,
GSM1518131 ,
GSM1518132 ,
GSM1518133 ,
GSM1518134 ,
GSM1518135 ,
GSM1518136 ,
GSM1518137 ,
GSM1518138 ,
GSM1518139 ,
GSM1518140 ,
GSM1518141 ,
GSM1518142 ,
GSM1518143 ,
GSM1518144 ,
GSM1518145 ,
GSM1518146 ,
GSM1518147 ,
GSM1518148 ,
GSM1518149 ,
GSM1518150 ,
GSM1518151 ,
GSM1518152 ,
GSM1518153 ,
GSM1518154 ,
GSM1518155 ,
GSM1518156 ,
GSM1518157 ,
GSM1518158 ,
GSM1518159 ,
GSM1518160 ,
GSM1518161 ,
GSM1518162 ,
GSM1518163 ,
GSM1518164 ,
GSM1518165 ,
GSM1518166 ,
GSM1518167 ,
GSM1518168 ,
GSM1518169 ,
GSM1518170 ,
GSM1518171 ,
GSM1518172 ,
GSM1518173 ,
GSM1518174 ,
GSM1518175 ,
GSM1518176 ,
GSM1518177 ,
GSM1518178 ,
GSM4081789 ,
GSM4081790 ,
GSM4081791 ,
GSM4081792 ,
GSM4570142 ,
GSM4570143 ,
GSM4570144 ,
GSM4570145 ,
GSM4570146 ,
GSM4570147 ,
GSM4570148 ,
GSM4570149 Series (19)
GSE12179 Expression profiling of skeletal muscle in beef cattle treated with steroidal growth promoters
GSE20190 Transcriptional properties of the endometrial macrophage in the pregnant cow
GSE21585 Transcription profiling of horned and polled and scurs cattle
GSE24070 PACAP and TNF regulate discrete population of genes in bovine chromaffin cells
GSE25554 The Transcriptional Landscape of Bovine Skeletal Muscle
GSE26318 Comparison of gene expression profile of bovine muscle samples
GSE40884 Comparison of gene expression profile of thymus samples from prednisolone-treated and control cows.
GSE46411 Transcriptomic profiles of beef marbling
GSE47827 Comparison of gene expression profile of muscle samples from growth promoters-treated and control cows.
GSE50035 Comparison of gene expression profile of testis samples from prednisolone-treated and control cows
GSE50036 Comparison of gene expression profile of biceps brachii muscle samples from prednisolone-treated and control cows
GSE50037 Comparison of gene expression profile of different tissue samples from prednisolone-treated and control cows
GSE50757 Comparison of gene expression profile of lymphocytes samples from prednisolone-treated and control cows.
GSE52779 Comparison of gene expression profile of muscle samples from growth promoters-treated and control calves.
GSE52883 Comparison of gene expression profile of muscle samples stored under vacuum at +4°C up to 14 days from growth promoters-treated and control cows.
GSE61934 Gene expression profiling of bovine muscle samples upon experimental treatment with dexamethasone and dexamethasone/Clenbuterol combination
GSE62002 The transcriptome of muscle and liver is responding differently to a combined trenbolone acetate and estradiol implant in cattle
GSE137566 Transcriptomic profile of semitendinosus muscle of bulls of different breed and performance (Limusine vs Holstein-Friesian)
GSE151274 Transcriptomic profile of primary culture of skeletal muscle cells isolated from semitendinosus muscle of bulls of different performance
Relations Alternative to
GPL9712
Data table header descriptions ID Agilent feature number
COL Column
ROW Row
NAME NAME
SPOT_ID Spot identifier
CONTROL_TYPE Control type
REFSEQ RefSeqAccession
GB_ACC GenBank Accession Number
LOCUSLINK_ID LocuslinkID
GENE_SYMBOL Gene Symbol
GENE_NAME Gene Name
UNIGENE_ID UnigeneID
ENSEMBL_ID EnsemblID
TIGR_ID TIGRID
ACCESSION_STRING Accession String
CHROMOSOMAL_LOCATION Chromosomal Location
CYTOBAND Cytoband
DESCRIPTION Description
GO_ID GoIDs
SEQUENCE Sequence
Data table ID COL ROW NAME SPOT_ID CONTROL_TYPE REFSEQ GB_ACC LOCUSLINK_ID GENE_SYMBOL GENE_NAME UNIGENE_ID ENSEMBL_ID TIGR_ID ACCESSION_STRING CHROMOSOMAL_LOCATION CYTOBAND DESCRIPTION GO_ID SEQUENCE 1
266
170
GE_BrightCorner
--GE_BrightCorner
pos
2
266
168
DarkCorner
--DarkCorner
pos
3
266
166
DarkCorner
--DarkCorner
pos
4
266
164
DarkCorner
--DarkCorner
pos
5
266
162
DarkCorner
--DarkCorner
pos
6
266
160
DarkCorner
--DarkCorner
pos
7
266
158
DarkCorner
--DarkCorner
pos
8
266
156
DarkCorner
--DarkCorner
pos
9
266
154
DarkCorner
--DarkCorner
pos
10
266
152
DarkCorner
--DarkCorner
pos
11
266
150
DarkCorner
--DarkCorner
pos
12
266
148
A_73_114743
A_73_114743
FALSE
NM_174437
NM_174437 PROCR
ref|NM_174437
unmapped
Bos taurus protein C receptor, endothelial (EPCR) (PROCR)
AGATTTGGGAAGAGACACTGGTGCAATAGAGGTAGTGGTAACCAGAGAAATGATGAAAGT
13
266
146
A_73_112729
A_73_112729
FALSE
XM_584096
XM_584096 LOC538984
ref|XM_584096
unmapped
PREDICTED: Bos taurus similar to guanine nucleotide exchange factor p532 (LOC538984)
GTAAACTCCCATATCCCCATTTGGAATCTACTGAATGTATCGCCTTTTTACAGTACCAGT
14
266
144
A_73_105797
A_73_105797
FALSE
CB430562 CB430562
gb|Bos taurus similar to Homo sapiens calcium channel, voltage-dependent, beta 2 subunit (CACNB2), transcript variant 5
unmapped
Unknown
ATTAAAAAGGCTGGTAGCACCTTTTTGAAGAGTCAAACAATTTTGCTACTTCAAAGTACC
15
266
142
A_73_120360
A_73_120360
FALSE
XM_608786
XM_608786 LOC530317
ref|XM_608786
unmapped
Bos taurus similar to Homo sapiens SRY (sex determining region Y)-box 8 (SOX8)
CAATCTATTTTTTGGTGTCAAGTTTGAACTTTCGCTGTCACTTACCTGCGTGTGTTTCGC
16
266
140
A_73_100887
A_73_100887
FALSE
XM_617991
XM_617991 LOC537806
ref|XM_617991
unmapped
Bos taurus similar to Homo sapiens receptor tyrosine kinase-like orphan receptor 1 (ROR1)
AGCAGACACTGCAACAAGTATCTTCTGTGAAGTTTAACTGTGTCTTACCAACCAGGGCAG
17
266
138
A_73_115180
A_73_115180
FALSE
AW487759 AW487759
gb|Unidentified transcripts on BTA21 position 44342692-44343814
unmapped
Unknown
AATGAGCGAGTCACCATGTACTTTCCAAAAGGAGAAAATTATTTGTTTCACAATATGAGC
18
266
136
A_73_120152
A_73_120152
FALSE
XM_605725
XM_605725 LOC527335
ref|XM_605725
unmapped
Bos taurus similar to Homo sapiens ankyrin-repeat and fibronectin type III domain containing 1 (ANKFN1)
CAAAGTTATATCTGTTCCCCCTTGTCCCAGTGGAGGGTCAATAAATCACATGATGGCTTT
19
266
134
A_73_101723
A_73_101723
FALSE
CB454766 CB454766
gb|Bos taurus similar to Homo sapiens chromosome 1 open reading frame 182 (C1orf182)
unmapped
Unknown
CTGCCCCAATTCAGTAAATGAATTGTGGAACAAAGTTATTGTGTATGTTTTCCCTGCTGT
20
266
132
A_73_110110
A_73_110110
FALSE
XM_591804
XM_591804 LOC514021
ref|XM_591804
unmapped
Bos taurus similar to Homo sapiens zinc finger protein 599 (ZNF599), transcript variant 1
ACTTGTGGCCTCCTGGTCTCACTGGGGCATCCTGTTCCCAAAGCAGAGCTGATTCACCTA
45220 10352 Kbytes .Supplementary file Size Download File type/resource GPL7053_old_annotations.txt.gz
2.9 Mb
(ftp) (http) TXT
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