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Sample GSM1275901 Query DataSets for GSM1275901
Status Public on May 04, 2015
Title Bos taurus_biceps brachii_BE24
Sample type RNA
 
Source name Bovine biceps brachii samples collected at the slaughterhouse
Organism Bos taurus
Characteristics tissue: biceps brachii
treatment: BROTIZOLAM+ESTRADIOL
Treatment protocol P: Prednisolone 15 mg/animal/day per os for 31 days; Brotizolam 0.02 mg/Kg per os for 31 days plus estradiol im 5 mg/animal/week for 6 times; Dexamethazone 0.4 mg/animal day per os for 31 days plus estradiol 5 mg/animal/week im for 6 times; Ractopamina 80 mg/animal/day per os for 31 days plus nandrosol 150 mg/animal every 2 weeks for 4 times
Extracted molecule total RNA
Extraction protocol Extracted using the QiAgen RNeasy Mini Kit protocol for tissue samples
Label Cyanine 3
Label protocol Amplified and labeled according to Agilent One-Color Microarray-Based Gene Expression Analysis protocol
 
Hybridization protocol Hybridized according to Agilent One-Color Microarray-Based Gene Expression Analysis protocol
Scan protocol Array was scanned according to standard Agilent protocol at a resolution of 5 microns modifying default setting to scan the slide twice at two different sensitivity settings (XDRHi 100% and XDRLo 10%)
Description Sample of bovine biceps brachii
Data processing Data processed with FeatureExtraction v9.5 and normalized using cyclic lowess by R 2.11.1 statistical software
 
Submission date Nov 26, 2013
Last update date May 04, 2015
Contact name sara pegolo
E-mail(s) sara.pegolo@unipd.it
Organization name university of padua
Street address viale dell'università 16
City legnaro
ZIP/Postal code 35020
Country Italy
 
Platform ID GPL7053
Series (1)
GSE52779 Comparison of gene expression profile of muscle samples from growth promoters-treated and control calves.

Data table header descriptions
ID_REF
VALUE Normalized intensities

Data table
ID_REF VALUE
12 1806.700852
13 4.476984125
14 4.537554527
15 326.7884131
16
17 8.118547357
18 88.31670384
19 5.620901804
20 70.66089948
21 4829.979681
22 183.541898
23 49.95159614
24 9.471601307
25 11940.08174
26 7.180824453
27 33.55744269
28
29
30 2208.122611
31 2029.868403

Total number of rows: 44343

Table truncated, full table size 663 Kbytes.




Supplementary file Size Download File type/resource
GSM1275901_BE24.txt.gz 5.9 Mb (ftp)(http) TXT
Processed data included within Sample table

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