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Sample GSM1213051 Query DataSets for GSM1213051
Status Public on Dec 22, 2016
Title Bos taurus_biceps brachii_P30
Sample type RNA
 
Source name Bos tauru_biceps brachii_prednisolone treated
Organism Bos taurus
Characteristics treated with: prednisolone 30 mg/head daily per os for 35 days
tissue: biceps brachii muscle
Treatment protocol prednisolone 30 mg/head daily per os for 35 days
Extracted molecule total RNA
Extraction protocol Extracted using the Invitrogen TRIzol reagent and purified according to the QiAgen RNeasy MinElute Cleanup Kit protocol for tissue samples
Label Cyanine 3
Label protocol Amplified and labeled according to Agilent One-Color Microarray-Based Gene Expression Analysis protocol
 
Hybridization protocol Hybridized according to Agilent One-Color Microarray-Based Gene Expression Analysis protocol
Scan protocol Array was scanned according to standard Agilent protocol at a resolution of 5 microns modifying default setting to scan the slide twice at two different sensitivity settings (XDRHi 100% and XDRLo 10%)
Description Bovine biceps brachii samples collected at the slaughterhouse
Data processing Data processed with FeatureExtraction v9.5 and normalized using cyclic lowess by R 2.11.1 statistical software
 
Submission date Aug 20, 2013
Last update date Dec 22, 2016
Contact name sara pegolo
E-mail(s) sara.pegolo@unipd.it
Organization name university of padua
Street address viale dell'università 16
City legnaro
ZIP/Postal code 35020
Country Italy
 
Platform ID GPL7053
Series (2)
GSE50036 Comparison of gene expression profile of biceps brachii muscle samples from prednisolone-treated and control cows
GSE50037 Comparison of gene expression profile of different tissue samples from prednisolone-treated and control cows

Data table header descriptions
ID_REF
VALUE Normalized intensities (null corresponds to missing spot; empty corresponds to control spot not included in the normalization)

Data table
ID_REF VALUE
1
2
3
4
5
6
7
8
9
10
11
12 1455.864358
13 4.565596284
14 5.103760914
15 274.9238252
16 5.922046222
17 11.76981042
18 35.81896043
19 72.63306515
20 35.24016672

Total number of rows: 44407

Table truncated, full table size 686 Kbytes.




Supplementary file Size Download File type/resource
GSM1213051_P_30.txt.gz 6.5 Mb (ftp)(http) TXT
Processed data included within Sample table

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