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Series GSE197113 Query DataSets for GSE197113
Status Public on Feb 22, 2022
Title Targeted gene expression profiling of human myeloid cells from blood and lung compartments of patients with Tuberculosis and other lung diseases
Organism Homo sapiens
Experiment type Expression profiling by RT-PCR
Summary This was a pilot study aimed at uncovering the role of myeloid-derived suppressor cells (myeloid-derived suppressor cell) in patients with Tuberculosis and differences between cells found in peripheral blood and in the lung.
Fluidigmâ„¢ RT-PCR technology was used to quantify expression levels of 43 genes in monocytecytes and myeloid-derived suppressor cell from peripheral blood and monocytecytes and alveolar macrophages from bronchoalveolar lavage fluid taken from patients with Tuberculosis or other lung diseases.
 
Overall design Gene expressions levels were compared between lung and blood derived cells within and between TB patients and healthy controls
 
Contributor(s) Kotze LA, van der Spuy GD
Citation(s) 35356003
Submission date Feb 21, 2022
Last update date Apr 06, 2022
Contact name Gian van der Spuy
Organization name Stellenbosch University
Department Biomedical Sciences
Street address Francie van Zijl Dr
City Parow
ZIP/Postal code 7530
Country South Africa
 
Platforms (1)
GPL31965 Fluidigm BioMark HD-HX
Samples (84)
GSM5909326 S01_16X
GSM5909327 S01_20X
GSM5909328 S03_16X
Relations
BioProject PRJNA808999

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE197113_IFC2_datafile.csv.gz 182.0 Kb (ftp)(http) CSV
GSE197113_processed.csv.gz 107.5 Kb (ftp)(http) CSV
Processed data included within Sample table
Processed data are available on Series record

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