GSE12889 |
CTCF demarcates chromatin domains |
GSE12946 |
Alternative Isoform Regulation in Human Tissue Transcriptomes |
GSE13047 |
Genome-Wide Mapping of in Vivo Protein-DNA Interactions |
GSE13084 |
Mapping polycomb complexes in human and mouse embryonic stem cells |
GSE13308 |
Chromatin architecture organized by histone variants H3.3 and H2A.Z in the human genome |
GSE13518 |
Nascent RNA sequencing reveals widespread pausing and divergent initiation at human promoters |
GSE13652 |
Deep surveying of alternative splicing complexity in the human transcriptome by high-throughput sequencing |
GSE14092 |
An Integrated Network of Androgen Receptor and TMPRSS2-ERG Gene Fusion in Prostate Cancer Progression (II) |
GSE14097 |
An Integrated Network of Androgen Receptor and TMPRSS2-ERG Gene Fusion in Prostate Cancer Progression |
GSE14511 |
Quantification of synthetic miRNAs |
GSE14664 |
ChIP-Seq of ERalpha and RNA polymerase II defines genes differentially responding to ligands |
GSE14966 |
Distinct DNA methylation patterns characterize differentiated human embryonic stem cells and developing human fetal liver |
GSE15229 |
Massively Parallel Sequencing Identifies the MicroRNA Transcriptome of Normal and Malignant Human B cells |
GSE15353 |
Genome-wide profiles of STAT1 DNA association using chromatin immunoprecipitation and massively parallel sequencing |
GSE15594 |
Distinctive Chromatin in Human Sperm Packages Genes that Guide Embryo Development |
GSE15690 |
Distinctive Chromatin in Human Sperm Packages Genes that Guide Embryo Development: ChIP-seq |
GSE15735 |
Genome-wide mapping of HATs and HDACs in human CD4+ T cells |
GSE15756 |
MicroRNA profiling of human neural stem cells |
GSE15780 |
Interplay between c-Jun and TAp73α/β contributes to the apoptosis-survival balance |
GSE15967 |
Identification of Genes Preferentially Required for Growth of p53-Deficient Human Cancer Cells |
GSE16060 |
The non-coding RNA of the multidrug resistance-linked vault particle encodes multiple regulatory small RNAs |
GSE16256 |
UCSD Human Reference Epigenome Mapping Project |
GSE16579 |
miRNA expression of human cancer and mouse cell lines |
GSE16642 |
Illumina mRNA-Seq of control and hnRNP H knockdown in 293T cells |
GSE16657 |
Chromatin Poises miRNA- and Protein-coding Genes for Expression |
GSE16921 |
Polymorphic cis- and trans-regulation of human gene expression |
GSE17352 |
HeLa input control in high salt condition |
GSE17403 |
Multiple platform assessment of the EGF dependent transcriptome by microarray and deep tag sequencing analysis |
GSE17554 |
Nucleosome deposition and DNA methylation at coding region boundaries |
GSE17611 |
Genome-wide profiling of p63 binding sites identifies genes and regulatory elements for p63-related disorders |
GSE17917 |
Distinct epigenomic landscapes of pluripotent and lineage-committed human cells |
GSE17972 |
The DNA methylome of human peripheral blood mononuclear cells |
GSE18046 |
An Estrogen Receptor α-bound Human Chromatin Interactome |
GSE18199 |
Comprehensive mapping of long-range interactions reveals folding principles of the human genome. |
GSE18245 |
Elucidating the stromal expression pattern in response to tumor-derived Shh |
GSE18886 |
PML-RARa/RXR alters the epigenetic landscape in Acute Promyelocytic Leukemia |
GSE18989 |
Genome-wide maps of HNF4a and HNF4g binding state in HepG2 cells. |
GSE18990 |
Proteomic analysis of native hepatocyte nuclear factor-4{alpha} (HNF4{alpha}) isoforms, phosphorylation status, and interactive cofactors. |
GSE19013 |
ChIP-Seq analysis of ER binding sites in MCF7 breast cancer cells |
GSE19063 |
Genome-wide map of PAX3-FKHR binding sites in rhabdomyosarcoma |
GSE19166 |
Next generation sequencing of human brain tissues transcriptome |
GSE19235 |
Genomic targets of the KRAB and scan domain-containing zinc finger protein 263 (ZNF263). |
GSE19323 |
PTB CLIP-seq |
GSE19373 |
Regulation of alternative splicing by histone modifications |
GSE19545 |
Genome-wide mapping of Jun binding site (K562) |
GSE19546 |
Genome-wide mapping of Fos binding site (K562) |
GSE19547 |
Genome-wide mapping of Myc binding site (K562) |
GSE19548 |
Genome-wide mapping of RNA Pol III binding site (K562) |
GSE19549 |
Genome-wide mapping of RNA Pol III binding site (GM12878) |
GSE19550 |
Genome-wide mapping of RNA Pol II binding site (GM12878) |
GSE19551 |
Close Association of RNA Polymerase II and Many Transcription Factors With Pol III Genes |
GSE19622 |
Individual-specific and allele-specific chromatin signatures in diverse human populations |
GSE19812 |
Analysis of microRNA transcriptome by deep sequencing of small RNA libraries of peripheral blood (seq data) |
GSE19833 |
Analysis of microRNA transcriptome by deep sequencing of small RNA libraries of peripheral blood |
GSE19898 |
Genome-wide analysis of RB and p130 binding in human diploid fibroblasts |
GSE19899 |
Dissecting the unique role of the retinoblastoma tumor suppressor during cellular senescence |
GSE20042 |
Genome-wide maps of H3K4me2/3 in prostate cancer cell line LNCaP |
GSE20384 |
Mammalian microRNAs: Experimental evaluation of novel and previously annotated genes |
GSE20512 |
Chromatin Analysis of Wilms Tumor Highlights Stem Cell Properties and a Renal Developmental Network |
GSE20592 |
Ultra-high throughput sequencing-based small RNA discovery and discrete statistical biomarker analysis in a collection of cervical tumors and matched controls |
GSE20650 |
Genome-wide mapping of OCT4, NANOG and CTCF in human embryonic stem cells |
GSE20751 |
Genome-wide analysis of snRNAs bound to Gemin5 upon protein synthesis inhibition |
GSE20752 |
Comparative Epigenomic Analysis of Murine and Human Adipogenesis |
GSE20892 |
Identification and analysis of miRNA target genes in a cell system |
GSE21026 |
Genome-wide assessment of differential roles for p300 and CBP in transcription regulation |
GSE21068 |
Estrogen-mediated Epigenetic Repression of Large Chromosomal Regions through DNA Looping |
GSE21108 |
The mental retardation gene PHF8 mediates histone H4K20/H3K9 demethylation and regulates zebrafish brain apoptosis and craniofacial development: ChIP-Seq analysis |
GSE21141 |
Derivation of pre-X inactivation human embryonic stem cells under physiological oxygen concentrations |
GSE21159 |
DNA copy number, including telomeres and mitochondria, assayed using next-generation sequencing |
GSE21172 |
Developmental Regulation and Individual Differences of Neuronal Epigenomes in the Prefrontal Cortex |
GSE21200 |
OCT4, NANOG and CTCF in human embryonic stem cells |
GSE21227 |
Characterization of the RNA content of chromatin |
GSE21279 |
Small RNA Solexa sequencing of human liver samples |
GSE21366 |
Epigenomic profiling of hASC adipogenesis |
GSE21439 |
E2F4 and its cofactor transfection vs empty vector transfection |
GSE21442 |
Comprehensive analysis of orphan CpG islands identifes novel promoters with conserved DNA methylation dynamics |
GSE21488 |
Genome-wide target discovery of transcripton factor E2F4 by ChIP-seq |
GSE21489 |
Wide-ranging fucntions of E2F4 in transcriptional activation and repression revealed by genome-wide analysis |
GSE21578 |
Transcriptome-wide identification of RNA-binding protein and microRNA target sites by PAR-CLIP |
GSE21714 |
Comparative methylome analysis of benign and malignant peripheral nerve sheath tumors |
GSE21770 |
Genome-wide maps of ERbeta binding sites in U2OS cells |
GSE21790 |
Genome wide analysis of ER beta in U2OS cells |
GSE21918 |
Transcriptome-wide identification of RNA-binding protein and microRNA target sites by PAR-CLIP: sequencing data |
GSE21939 |
Phosphorylation of p53 Serine 46 contributes to target gene selectivity of p53 (ChIP-seq) |
GSE22068 |
Expanding the MicroRNA Targeting Code: A Novel Type of Site with Centered Pairing |
GSE22078 |
[E-TABM-722] Transcription factor binding evolution in five vertebrates |
GSE22162 |
A SNF2 protein targets variable copy number repeats and thereby influences allele-specific expression |
GSE22186 |
Phosphorylation of p53 Serine 46 contributes to target gene selectivity of p53 |
GSE22376 |
Phyloepigenetic comparison of apes |
GSE22400 |
PHF8 mediates histone demethylation events in cell cycle progression |
GSE22478 |
PHF8 mediates histone demethylation events in cell cycle progression [ChIP-Seq] |
GSE22499 |
Chromatin Structure and Gene Expression Programs of Human Embryonic and Induced Pluripotent Stem Cells |
GSE22609 |
Genome-Wide Maps of WT and DBDmut Estrogen Receptor in Human Breast Cancer Cells |
GSE22610 |
Genome-Wide Analysis of Estrogen Receptor-α DNA Binding and Tethering Mechanisms |
GSE22765 |
SplicePL: de novo splice junction detection from paired-end RNA-seq reads |
GSE22898 |
Deep Sequencing of the Small RNA Transcriptome of Normal and Malignant Human B cells Identifies Hundreds of Novel MicroRNAs |
GSE22917 |
SAGE-Seq gene expression profiles of Hs578T, MCF7, and SUM159PT cells treated with STAT3 or non-targeting siRNAs, DMSO, or CXCR2, PTGIS, HAS1, PFKFB3, JAK, or NQO1 inhibitor |
GSE22918 |
Deep Sequencing of Human Nuclear and Cytoplasmic Small RNAs Reveals an Unexpectedly Complex Subcellular Distribution of miRNAs and tRNA 3' Trailers |
GSE23415 |
Reprogramming of Human Fibroblasts into Hematopoietic Progenitors by Fusion With Human Fetal Liver CD34+ Cells (RNA-Seq) |
GSE23416 |
Reprogramming of Human Fibroblasts into Hematopoietic Progenitors by Fusion With Human Fetal Liver CD34+ Cells |
GSE23455 |
Chromatin Structure and Gene Expression Programs of Human Embryonic and Induced Pluripotent Stem Cells (ChIP-seq) |
GSE23694 |
Analysis and design of RNA sequencing experiments for identifying mRNA isoform regulation |
GSE23730 |
Oncofusion protein AML1-ETO targets ERG factor binding sites in AML |
GSE23784 |
Global epigenomic analysis of primary human pancreatic islets provides insights into type 2 diabetes susceptibility loci |
GSE23792 |
Genome-wide analysis of insulin-like growth factor 1 receptor (IGF1R) binding sites in DFB cells |
GSE23795 |
Chip-Seq analysis of Sox2 protein genome-wide DNA binding sites in glioma cancer cells |
GSE23839 |
An integrative analysis of the SOX2 response program in glioblastoma |
GSE24283 |
Deep transcriptional sequencing analysis of human prostate adenocarcinoma and reference samples |
GSE24284 |
Deep sequencing analysis of transcription-induced chimeras in human prostate adenocarcinoma and reference samples |
GSE24447 |
A unique chromatin signature uncovers early developmental enhancers in humans |
GSE24491 |
Gene expression profiling of human tissue samples using SAGE-Seq |
GSE24518 |
Co-activation of GR and NF-kB leads to extensive rearrangemnet of their binding sites and target genes |
GSE24565 |
Small RNA-seq from ENCODE/Cold Spring Harbor Lab |
GSE24632 |
ZNF274 colocalizes with the histone methyltransferase SETDB1 at ZNF 3' ends. |
GSE24685 |
Genome-wide binding of the orphan nuclear receptor TR4 suggests its general role in fundamental biological processes |
GSE24933 |
Genome-wide mapping of the transcription factor GABP-alpha binding in human CD34+CD133+ hematopoietic progenitor cells. |
GSE25000 |
Differential genomic targeting of the transcription factor TAL1 in alternate hematopoietic lineages |
GSE25018 |
Identification of stromally expressed molecules in the prostate by Tag profiling of cancer-associated fibroblasts, normal fibroblasts and fetal prostate |
GSE25021 |
[E-TABM-828] ChIP-Seq in human MCF7 and HEPG2 cells |
GSE25126 |
[E-MTAB-189] Genomewide Analysis of Histone Modifications in Normal Human Islets |
GSE25183 |
Transcriptome sequencing across a prostate cancer cohort identifies PCAT-1, an unannotated lincRNA implicated in disease progression (RNA-Seq data) |
GSE25210 |
Genome-wide mapping of Flag-Evi1 in SKOV-3 ovarian carcinoma cells |
GSE25213 |
EVI1 and AP1 Interact to Transcriptionally Regulate a Feed-Forward Loop Important for Cancer Cell Proliferation and Adhesion |
GSE25291 |
Altered antisense-to-sense transcript ratios in breast cancer: Sage-Seq |
GSE25292 |
Altered antisense-to-sense transcript ratios in breast cancer |
GSE25344 |
High-resolution genome-wide in vivo footprinting of diverse transcription factors in human cells (Dnase-seq) |
GSE25416 |
High-resolution genome-wide in vivo footprinting of diverse transcription factors in human cells (ChIP-seq) |
GSE25426 |
Functional and cellular constraints that shaped the PPARg binding landscape in human and mouse macrophages: human ChIP-Seq |
GSE25442 |
High-resolution genome-wide in vivo footprinting of diverse transcription factors in human cells |
GSE25450 |
RNA polyadenylation landscape in human and mouse cells |
GSE25494 |
Global impact of RNA polymerase II elongation inhibition on alternative splicing regulation (ChIP-Seq) |
GSE25495 |
Global impact of RNA polymerase II elongation inhibition on alternative splicing regulation |
GSE25577 |
Whole-genome landscape of histone H2AX and γ-H2AX |
GSE25599 |
RNA-seq analysis generated a comprehensive landscape of transcriptomes and revealed complex patterns of transcripts in Chinese HBV-related hepatocellular carcinoma |
GSE25608 |
Functional and cellular constraints that shaped the PPARg binding landscape in human and mouse macrophages |
GSE25684 |
[E-MTAB-131] Estrogen Receptor alpha estrogen-responsive binding sites in MCF-7 |
GSE25686 |
[E-TABM-482] DNA methylome of human spermatozoa |
GSE25694 |
[E-MTAB-115] ChIP-seq for FOXA2 HNF4a and NRF2 / GABP in HepG2 |
GSE25836 |
Metabolic Transcription Factors Mediate Conserved Functions Largely via Species-Specific Binding Regions |
GSE25862 |
Mapping of INS promoter interactions reveals its role in long-range regulation of SYT8 transcription |
GSE25882 |
Genome-wide maps of chromatin state in NCCIT cells |
GSE25932 |
Altered antisense-to-sense transcript ratios in breast cancer: ASSAGE |
GSE26083 |
Genome-wide maps of Tamoxifen resistance MCF7 cell line |
GSE26109 |
A human transcriptome array for high-throughput clinical studies (with a comparison to RNA-seq technology) [RNA-Seq] |
GSE26118 |
A human transcriptome array for high-throughput clinical studies (with a comparison to RNA-seq technology) |
GSE26137 |
Epigenetic regulation of cell type-specific expression patterns in the human mammary epithelium [ChIP-Seq] |
GSE26139 |
Epigenetic regulation of cell type-specific expression patterns in the human mammary epithelium [MSDK-Seq] |
GSE26140 |
Epigenetic regulation of cell type-specific expression patterns in the human mammary epithelium [SAGE-Seq] |
GSE26141 |
Epigenetic regulation of cell type-specific expression patterns in the human mammary epithelium |
GSE26284 |
ENCODE Cold Spring Harbor Labs Long RNA-seq |
GSE26427 |
Global Mapping of H3K4me1 and H3K4me3 in human CD4+CD25+FOXP3+ Treg cells |
GSE26501 |
Regulation of nucleosome landscape and transcription factor binding at enhancers by BRG1 |
GSE26592 |
Neighboring genomic regions influence differential methylation patterns of CpG islands in endometrial and breast cancers |
GSE26598 |
hDot1L and RNAPII-5p in NCCIT cells. |
GSE26810 |
Regulation of DNA methylation by CK2-mediated phosphorylation of DNMT3A (Methyl-Seq) |
GSE26970 |
Post-transcriptional generation of miRNA variants by multiple nucleotidyl transferases contributes to miRNA transcriptome complexity |
GSE27158 |
Cytokine receptor modulation by interleukin-2 broadly regulates T helper cell lineage differentiation |
GSE27450 |
Cross-species comparison of C/EBPα and PPARγ profiles in mouse and human adipocytes reveals interdependent retention of binding sites |
GSE27463 |
Global Analysis of the Immediate Transcriptional Effects of Estrogen Signaling Reveals a Rapid, Extensive, and Transient Response |
GSE27584 |
DNA Methylation by Reduced Representation Bisulfite Seq from ENCODE/HudsonAlpha |
GSE27619 |
Deep sequencing reveals distinct patterns of DNA methylation and transcript isoform regulation in prostate cancer |
GSE27929 |
Functional analysis of Kap1 genomic recruitment |
GSE27977 |
Smad3 regulates the miR-200 family in gastric cancer |
GSE28051 |
Genome-wide map of BACH1 binding in HEK 293T cells |
GSE28053 |
Role of BACH1 in HEK 293T cells |
GSE28123 |
Protocol Dependence of Sequencing-based Gene Expression Measurements |
GSE28126 |
The androgen receptor coordinates biosynthesis and proliferation in prostate cancer |
GSE28162 |
L3MBTL2 protein acts in concert with PcG protein mediated monoubiquitination of H2A to establish a repressive chromatin structure [ChIP-Seq data]. |
GSE28286 |
Genome-wide analysis of transcription factor E2F1 mutant proteins reveals that N- and C-terminal protein interaction domains do not participate in targeting E2F1 to the human genome. |
GSE28323 |
Genome-wide maps of KDM5A/JARID1A/RBP2 and its isoforms in differentiated U937 cells |
GSE28337 |
Genome-wide maps of KDM5A/JARID1A/RBP2 and KDM5B/JARID1B/PLU1 in estrogen treated MCF7 cells. |
GSE28874 |
Genome-wide analysis of p300, H3K4me3, H3K4me1, H3K27me3 and H3K27ac in in vitro differentiated human neural crest cells (hNCC) |
GSE28875 |
RNA-seq experiments in human neural crest cells (hNCC) |
GSE28876 |
Epigenomic profiling of enhancers identifies orphan nuclear receptors NR2F1 and NR2F2 as novel regulators of human neural crest |
GSE29071 |
High-throughput sequencing of ES cell lines, ES-derived cells, and fetal and normal livers |
GSE29155 |
RNA-Seq anlalysis of prostate cancer cell lines using Next Generation Sequencing |
GSE29158 |
RNA-sequence analysis of human B-cells |
GSE29222 |
Depletion of RUNX1/ETO in t(8;21) AML cells leads to genome-wide changes in chromatin structure and transcription factor binding [ChIP-Seq and DNAse-Hypersensitivity data] |
GSE29225 |
Depletion of RUNX1/ETO in t(8;21) AML cells leads to genome-wide changes in chromatin structure and transcription factor binding |
GSE29251 |
Genome-wide analysis distinguishes hyperglycemia regulated epigenetic signatures of primary vascular cells (ChIP-seq) |
GSE29498 |
Epstein-Barr Virus Exploits Intrinsic B-Lymphocyte Transcription Programs to Achieve Immortal Cell Growth |
GSE29531 |
Genetic Framework for GATA Factor Function in Vascular Biology |
GSE29580 |
RNA-seq of two paired normal and cancer tissues in two stage III colorectal cancer patients |
GSE29600 |
Genome-wide Analysis Reveals Conserved and Divergent Features of Notch1/RBPJ Binding in Human and Murine T Lymphoblastic Leukemia Cells |
GSE29660 |
RNA-sequencing of TGF-ß1-driven gene expression in human kidney cell line |
GSE29692 |
DNaseI Hypersensitivity by Digital DNaseI from ENCODE/University of Washington |
GSE29779 |
Integrative regulatory mapping indicates that the RNA-binding protein HuR (ELAVL1) couples pre-mRNA processing and mRNA stability [sequence data] |
GSE29780 |
Integrative regulatory mapping indicates that the RNA-binding protein HuR (ELAVL1) couples pre-mRNA processing and mRNA stability |
GSE29904 |
Post-transcriptional generation of miRNA variants by multiple nucleotidyl transferases contributes to miRNA transcriptome complexity (normal prostate and prostate cells) |
GSE30082 |
IkBa associates with histone H2A in human keratinocytes |
GSE30224 |
Open chromatin defined by DNaseI and FAIRE identifies regulatory elements that shape cell-type identity [DNase_seq]. |
GSE30225 |
Open chromatin defined by DNaseI and FAIRE identifies regulatory elements that shape cell-type identity [FAIRE_seq] |
GSE30226 |
Open chromatin defined by DNaseI and FAIRE identifies regulatory elements that shape cell-type identity [ChIP_seq]. |
GSE30227 |
Open chromatin defined by DNaseI and FAIRE identifies regulatory elements that shape cell-type identity |
GSE30254 |
Chromatin accessibility, p300 and histone acetylation define PML-RARalpha- and AML1-ETO-binding sites |
GSE30263 |
CTCF Binding Sites by ChIP-seq from ENCODE/University of Washington |
GSE30290 |
An EMT-driven alternative splicing program occurs in human breast cancer and modulates cellular phenotype. |
GSE30623 |
Dual Role of FoxA1 in Androgen Receptor Binding to Chromatin, Androgen Signaling and Prostate Cancer [ChIP_seq, DHS_seq] |
GSE30624 |
Dual Role of FoxA1 in Androgen Receptor Binding to Chromatin, Androgen Signaling and Prostate Cancer |
GSE30726 |
Deep sequencing of MYC DNA-binding sites in Burkitt's lymphoma |
GSE30871 |
Genome-Wide Progesterone Receptor Binding: Cell Type-Specific and Shared Mechanisms in Uterine Fibroids and Breast Cancer |
GSE30902 |
Splicing enhances recruitment of methyltransferase HYPB/Setd2 and methylation of histone H3 lysine 36 |
GSE30992 |
An Alternative Splicing Switch Regulates Embryonic Stem Cell Pluripotency and Reprogramming |
GSE30995 |
An Alternative Splicing Switch Regulates Embryonic Stem Cell Pluripotency and Reprogramming [RNA-Seq] |
GSE31052 |
SAGA and ATAC histone acetyl transferase complexes regulate distinct sets of genes and ATAC defines a class of p300-independent enhancers |
GSE31105 |
Chromatin Conformation Capture in two biological replicates of K562 cells to identify interactions between tRNA genes in human cells. |
GSE31125 |
Integrated epigenome profiling of repressive histone modifications, DNA methylation and gene expression in normal and malignant urothelial cells [ChIP-Seq data] |
GSE31151 |
Breast cancer risk-associated SNPs modulate the affinity of chromatin for FOXA1 and alter gene expression |
GSE31263 |
The DNA methylomes of a newborn and a centenarian |
GSE31454 |
Species-specific splicing differences are primarily governed by changes in cis-acting sequences |
GSE31477 |
ENCODE Transcription Factor Binding Sites by ChIP-seq from Stanford/Yale/USC/Harvard |
GSE31621 |
Dynamic epigenetic enhancer signatures are predictive for key transcriptional regulators associated with cellular differentiation states |
GSE31728 |
Transcriptome sequencing across a prostate cancer cohort identifies PCAT-1, an unannotated lincRNA implicated in disease progression |
GSE31755 |
Histone Modifications by ChIP-seq from ENCODE/Stanford/Yale/Davis/Harvard |
GSE32017 |
Molecular profiling of human mammary gland links breast cancer risk to a p27+ cell population with progenitor characteristics |
GSE32324 |
ChIP-seq analysis LPS stimulated THP-1 cells |
GSE32325 |
Expression and ChIP-seq analysis LPS stimulated THP-1 cells |
GSE32332 |
Single-tube Linear DNA amplification (LinDA) for robust ChIP-seq |
GSE32345 |
Genome-wide maps of AR binding in prostate cancer cell lines VCaP and VCS2 |
GSE32349 |
Methylation specifies distinct estrogen-induced binding site repertoires of CBP to chromatin (ChIP-Seq) |
GSE32350 |
Methylation specifies distinct estrogen-induced binding site repertoires of CBP to chromatin |
GSE32356 |
AR binding in prostate cancer cell lines VCaP and VCS2 |
GSE32442 |
Functional association of Gdown1 with RNA Polymerase II in Human |
GSE32465 |
Transcription Factor Binding Sites by ChIP-seq from ENCODE/HAIB |
GSE32587 |
Large-Scale Discovery of Enhancers from Human Heart Tissue |
GSE32644 |
Genome-wide maps of MEF2C and H3K27ac localization in HUVECs |
GSE32663 |
Identification of 67 histone marks and histone lysine crotonylation as a new type of histone modification |
GSE32692 |
Cell-type specific and combinatorial usage of diverse transcription factors revealed by genome-wide binding studies in multiple human cells [new ChIP-Seq samples] |
GSE32874 |
Personal Omics Profiling Reveals Dynamic Molecular Phenotypes and Actionable Medical Risks |
GSE32883 |
Cell-type specific and combinatorial usage of diverse transcription factors revealed by genome-wide binding studies in multiple human cells |
GSE32931 |
ENCODE Cold Spring Harbor Labs Long RNA-seq (hg18) |
GSE32970 |
Open Chromatin by DNaseI HS from ENCODE/OpenChrom(Duke University) |
GSE33029 |
Integrated analysis of omics profiles |
GSE33049 |
GlcNAcylation of histone H2B facilitates its monoubiquitination [Illumina Genome Analyzer data] |
GSE33051 |
GlcNAcylation of histone H2B facilitates its monoubiquitination |
GSE33213 |
Open Chromatin TFBS by ChIP-seq from ENCODE/Open Chrom(UT Austin) |
GSE33216 |
Genome-wide maps of H3K4me2 and DNase I hypersensitivity sites in prostate cancer cell line LNCaP and breast cancer cell line MCF-7. |
GSE33480 |
RNA-seq from ENCODE/Caltech |
GSE33839 |
Identification of a novel set of DNA methylation markers in bladder cancer using MBD-methylCap/seq and urine DNA screening in a Chinese population |
GSE34001 |
RNA polymerase II pausing downstream of core histone genes is different from genes producing polyadenylated transcripts |
GSE34260 |
Candida albicans induces monocyte training via epigenetic programming through a dectin 1-dependent pathway |
GSE34448 |
RNA Subcellular CAGE Localization from ENCODE/RIKEN |
GSE34500 |
Genome-wide maps of RNA Polymerase II and p65 localization in HUVECs stimulated with TNF alpha |
GSE34540 |
Depletion of RUNX1/ETO in t(8;21) AML cells leads to genome-wide changes in chromatin structure and transcription factor binding (ChIP-seq) |
GSE34993 |
Integrative genome-wide analysis reveals cooperative regulation of alternative splicing by hnRNP proteins (CLIP-Seq) |
GSE34996 |
Integrative genome-wide analysis reveals cooperative regulation of alternative splicing by hnRNP proteins |
GSE35239 |
Open Chromatin by FAIRE from ENCODE/OpenChrom(UNC Chapel Hill) |
GSE35294 |
H3K79 methylation - cell cycle |
GSE35582 |
The characteristics of genome-wide DNA methylation in naïve CD4+ T cells of patients with psoriasis and atopic dermatitis |
GSE35583 |
Histone Modifications by ChIP-seq from ENCODE/University of Washington |
GSE35585 |
RIP-seq from ENCODE/SUNY Albany |
GSE35799 |
HNRPA2B1 HITS-CLIP |
GSE35800 |
Systematic Discovery of Structural Elements Governing Mammalian mRNA Stability |
GSE35829 |
Integrative functional genomics identifies an enhancer looping to the SOX9 gene disrupted by the 17q24.3 prostate cancer risk locus |
GSE35871 |
Alternative Splicing Networks Regulated by Signaling in Human T Cells |
GSE35878 |
Renormalization of GSE32442 and GSE33128 |
GSE35882 |
Whole Cell Extract |
GSE35886 |
Renormalization of GSE32442 and GSE33128 plus 1 control sample |
GSE36088 |
Extrachromosomal microDNAs and chromosomal microdeletions in normal tissues |
GSE36236 |
Small RNA sequencing of melanoma samples to deduce microRNA expression profiles |
GSE36242 |
Transcriptomic response to benzo[a]pyrene treatment in HepG2 cells (RNA-Seq) |
GSE36244 |
Transcriptomic response to benzo[a]pyrene treatment in HepG2 cells |
GSE36351 |
Transcriptional Regulation of the GPX1 Gene by TFAP2C and Aberrant CpG Methylation in Human Breast Cancer |
GSE36367 |
H1.4K34ac ChIP-sequencing in MCF-7 cells |
GSE36512 |
H3K9/14Ac in TC-797 genome |
GSE36526 |
Hes6 drives a network with therapeutic potential in castrate-resistant prostate cancer |
GSE36546 |
Genome-wide maps of CtBP binding profile in breast cancer cell line MCF-7 |
GSE36598 |
Global transcriptional role of CtBP in breast cancer cells |
GSE36614 |
Hes6 expression is controlled by c-Myc and the AR to promote E2F1 activity and poor outcome in castrate-resistant prostate cancer (E2F1 ChIP-seq) |
GSE36749 |
Mutant p53 cooperates with ETS2 to promote etoposide resistance [ChIP-Seq] |
GSE36752 |
Mutant p53 cooperates with ETS2 to promote etoposide resistance |
GSE36759 |
Small RNA sequencing in patients with Tetralogy of Fallot and healthy unaffected individuals |
GSE36761 |
mRNA expression profiling in patients with Tetralogy of Fallot and healthy unaffected individuals |
GSE36987 |
PAPD5, a noncanonical poly(A) polymerase with an unusual RNA-binding motif [PAR-CLIP] |
GSE37061 |
RNA-sequencing analysis of NB4 cells overexpressing miR-125b |
GSE37323 |
Genome-wide reprogramming of the chromatin landscape underlies endocrine therapy resistance in breast cancer |
GSE37398 |
Genome-wide analysis of pre-mRNA 3' end processing reveals a decisive role of human cleavage factor I in the regulation of 3' UTR length: CLIP |
GSE37401 |
Genome-wide analysis of pre-mRNA 3' end processing reveals a decisive role of human cleavage factor I in the regulation of 3' UTR length |
GSE37519 |
Threonine-4 of Mammalian RNA Polymerase II CTD is Targeted by Polo-like Kinase-3 and Required for Transcriptional Elongation |
GSE37589 |
Identification of Novel NRF2-Regulated Genes by ChIPSeq |
GSE37617 |
Hes6 expression is controlled by c-Myc and the AR to promote E2F1 activity and poor outcome in castrate-resistant prostate cancer (cMyc ChIP-seq) |
GSE38163 |
Chromatin State Segmentation by HMM from ENCODE/Broad |
GSE38284 |
Histone variant H2A.Bbd is associated with active transcription and mRNA processing in human cells [ChIP-Seq] |
GSE38338 |
Expression, ChIP-chip, and ChIP-Seq data from REH and SEM leukemia cell lines [ChIP-Seq] |
GSE38548 |
Somatic cell fusions reveal extensive heterogeneity in basal-like breast cancer |
GSE38555 |
Genome-wide maps of H3K27ac localization in HUVECs |
GSE38771 |
Histone variant H2A.Bbd is associated with active transcription and mRNA processing in human cells |
GSE38788 |
Somatic cell fusions reveal extensive heterogeneity in basal-like breast cancer [ChIP-Seq 1] |
GSE38861 |
ASXL1 Mutations Promote Myeloid Transformation Through Loss of PRC2-Mediated Gene Repression |
GSE38901 |
HSF1 drives a transcriptional program distinct from heat shock to support highly malignant human cancers [ChIP-Seq] |
GSE38912 |
HSF1 drives a transcriptional program distinct from heat shock to support highly malignant human cancers |
GSE38914 |
Correlation between DNase I hypersensitive site distribution and gene expression in HeLa S3 cells [DNase-Hypersensitivity] |
GSE38915 |
Correlation between DNase I hypersensitive site distribution and gene expression in HeLa S3 cells |
GSE39089 |
Genome-wide binding sites of Hypoxia inducible factor 1 (HIF1) and histone modifications |
GSE39162 |
Identification of new microRNAs in paired normal and tumor breast tissue suggests a dual role for the ERBB2/Her2 gene |
GSE39167 |
Investigating the genetic basis of RNA Editing in humans |
GSE39237 |
H2A.Z landscapes and dual modifications in pluripotent and multipotent stem cells underlie complex genome regulatory functions |
GSE39418 |
Genome-wide reprogramming of the chromatin landscape underlies endocrine therapy resistance in breast cancer |
GSE39495 |
Chromatin Interaction Analysis Paired-End Tags (ChIA-PET) from ENCODE/GIS-Ruan |
GSE39505 |
Chromatin Interactions by 5C from ENCODE/University of Washington |
GSE39510 |
Chromatin Interactions by 5C from ENCODE/Dekker Univ. Mass. |
GSE39872 |
LIN28 binds messenger RNAs at GGAGA motifs and regulates splicing factor abundance (HTS) |
GSE39873 |
LIN28 binds messenger RNAs at GGAGA motifs and regulates splicing factor abundance |
GSE39879 |
FoxA1 specifies unique androgen and glucocorticoid receptor binding events in prostate cancer cells (HTS) |
GSE39880 |
FoxA1 specifies unique androgen and glucocorticoid receptor binding events in prostate cancer cells |
GSE39983 |
miR-146a promotes the initiation and progression of melanoma by activating Notch signaling |
GSE40310 |
A model system for assessing the ability of tag sequencing to detect genes specific for malignant B-cells |
GSE40311 |
A model system for assessing the ability of exon microarray and tag sequencing to detect genes specific for malignant B-cells |
GSE40343 |
Genome wide maps of E2F7 binding in IMR90 cells |
GSE40502 |
Transcription and enhancer profiling in human monocyte subsets |
GSE40668 |
An atlas of in vivo transcribed enhancers in human primary cells |
GSE40724 |
Genome-Wide Progesterone Receptor Binding: Cell Type-Specific and Shared Mechanisms in Uterine Fibroids and Breast Cancer (ChIP-Seq) |
GSE40832 |
Whole Genome Bisulfite Sequencing by ENCODE/HAIB |
GSE40833 |
DNaseI/FAIRE/ChIP Synthesis from ENCODE/OpenChrom(Duke/UNC/UTA) |
GSE41304 |
ENCODE HudsonAlpha Methyl-seq |
GSE41466 |
Nucleosome driven transcription factor binding and gene regulation [ChIP-Seq] |
GSE41551 |
Genome-wide mapping of the TET3 CXXC domain binding sites |
GSE41617 |
Nucleosome driven transcription factor binding and gene regulati |
GSE41757 |
Correlated alterations in genome organization, histone methylation, and DNA-lamina interactions in Hutchinson-Gilford progeria syndrome (ChIP-seq) |
GSE41764 |
Correlated alterations in genome organization, histone methylation, and DNA-lamina interactions in Hutchinson-Gilford progeria syndrome |
GSE42313 |
Suppression of miRNA-708 by polycomb group promotes metastases by calcium-induced cell migration |
GSE42348 |
Integrative genomics of gene regulation by estrogen receptors and and coregulators [ChIP-seq] |
GSE42349 |
Integrative genomics of gene regulation by estrogen receptors and and coregulators |
GSE42354 |
Genome-wide mapping of Flag-Evi1Δ324 in SKOV-3 ovarian carcinoma cells |
GSE42728 |
Genome wide maps of p53 binding in IMR90 cells |
GSE43098 |
Mechanisms of PU.1 binding site selection in-vivo |
GSE43109 |
The role of HIF-1α and HIF-2α in hypoxic and M2-polarized macrophages |
GSE43119 |
The enhancer and promoter landscape of human regulatory and conventional T cell subpopulations |
GSE43170 |
RIP-seq data for CCNT1 |
GSE43705 |
Peripheral blood mononuclear cells HELP-tagging cytosine methylation data (Albert Einstein College of Medicine) |
GSE43835 |
Enhancer Transcripts Mark Active Estrogen Receptor Binding Sites |
GSE43836 |
Enhancer Transcripts Mark Active Estrogen Receptor Binding Sites using GRO-seq |
GSE43921 |
H3K4 demethylation by Jarid1a and Jarid1b contributes to retinoblastoma-mediated gene silencing during cellular senescence (ChIP-seq) |
GSE43922 |
H3K4 demethylation by Jarid1a and Jarid1b contributes to retinoblastoma-mediated gene silencing during cellular senescence |
GSE45497 |
Sequences Associated with Centromere Competency in the Human Genome |
GSE46166 |
Insights into the invasiveness of triple negative breast cancer from genome-wide profiling of transcription factor AP-1 (ChIP-seq) |
GSE46189 |
The spatio-temporal program of DNA replication is driven by specific epigenetic signatures in human cells |
GSE46441 |
Insights into the invasiveness of triple negative breast cancer from genome-wide profiling of transcription factor AP-1 |
GSE46461 |
Nucleosome positioning changes during human embryonic stem cell differentiation. |
GSE46467 |
Nucleosome positioning changes during human embryonic stem cell differentiation |
GSE46935 |
ChIP-seq of AP4 binding in human colorectal cancer cells DLD-1. |
GSE47078 |
RC3H1 posttranscriptionally regulates A20 mRNA and modulates the activity of the IKK/NF-kB pathway [PARCLIP] |
GSE47190 |
ChIP-seq of MYST acetyltransferases |
GSE49404 |
RMST associates with SOX2 to regulate neurogenesis [ChIP-Seq] |
GSE49405 |
RMST associates with SOX2 to regulate neurogenesis |
GSE49836 |
Hematopoietic stem/progenitor cells HELP-tagging cytosine methylation data |
GSE50782 |
Quantification of gene expression from primate tissue samples |
GSE50958 |
Genome-wide epigenetic analyses and Transcriptional analysis in NB4 cells expressing PML-RARalpha |
GSE51224 |
Dynamic Reorganization of the Cardiomyocyte Transcriptome in Response to TNFα-induced Proinflammatory Signaling [GRO-Seq] |
GSE51225 |
Dynamic Reorganization of the Cardiomyocyte Transcriptome in Response to TNFα-induced Proinflammatory Signaling |
GSE51334 |
DNA replication-timing boundaries separate stable chromosome domains with cell-type-specific functions |
GSE51336 |
Mouse regulatory DNA landscapes reveal global principles of cis-regulatory evolution |
GSE51428 |
Transcriptomic profiling reveals new aspects of progestin signaling in breast cancer |
GSE51621 |
Comprehensive Functional Annotation of 77 Prostate Cancer Risk Loci |
GSE52146 |
High resolution ChIP sequencing reveals novel bindings targets and prognostic role for SOX11 in Mantle cell lymphoma (ChIP-Seq) |
GSE52149 |
High resolution ChIP sequencing reveals novel bindings targets and prognostic role for SOX11 in Mantle cell lymphoma |
GSE52607 |
Novel primate miRNAs co-evolved with ancient target genes in germinal zone specific expression patterns [RISC trap immunoprecipitation] |
GSE52608 |
Novel primate miRNAs co-evolved with ancient target genes in germinal zone specific expression patterns |
GSE52637 |
HBS1L-MYB intergenic variants modulate fetal hemoglobin via long-range MYB enhancers |
GSE52687 |
The RON receptor tyrosine kinase promotes metastasis by triggering epigenetic reprogramming through the thymine glycosylase MBD4 (RNA-Seq) |
GSE52688 |
The RON receptor tyrosine kinase promotes metastasis by triggering epigenetic reprogramming through the thymine glycosylase MBD4 (Bisulfite-Seq) |
GSE52689 |
The RON receptor tyrosine kinase promotes metastasis by triggering epigenetic reprogramming through the thymine glycosylase MBD4 |
GSE53177 |
Hematopoietic stem/progenitor cells HELP-tagging cytosine methylation data (Albert Einstein College of Medicine) |
GSE53300 |
Gene expression profiling of breast cancer cells with knockdown of PTEN |
GSE53855 |
CDK2-dependent activation of PARP-1 is required for hormonal gene regulation in breast cancer cells. |
GSE54222 |
Hypermethylation in the ZBTB20 gene is associated with major depressive disorder |
GSE54456 |
Transcriptome analysis of psoriasis in a large case-control sample: RNA-seq provides insights into disease mechanisms |
GSE54854 |
Global Analysis of DNA Methylation by Methyl-Capture Sequencing Reveals Epigenetic change of pancreatic cancer |
GSE54921 |
High Resolution N6-Methyladenosine (m6A) Map Using Photo-crosslinking-Assisted m6A Sequencing |
GSE54961 |
Epigenome analysis of serum cell-free circulating DNA in progression of HBV-related Hepatocellular carcinoma |
GSE55757 |
Micro RNAs in pluripotent human stem cells |
GSE55758 |
Promoter methylome and integrative transcriptome profiling identify key epigenetics-regulated genes in human HCCs [expression] |
GSE55759 |
Promoter methylome and integrative transcriptome profiling identify key epigenetics-regulated genes in human HCCs |
GSE56086 |
PIAS1 is a target gene selective androgen receptor coregulator in prostate cancer cell chromatin |
GSE56414 |
miRNome of endometriotic lesion |
GSE57344 |
RNA-Seq Identifies Novel Myocardial Gene Expression Signatures of Heart Failure [RNA-seq] |
GSE57345 |
RNA-Seq Identifies Novel Myocardial Gene Expression Signatures of Heart Failure |
GSE57591 |
The oxidative demethylase ALKBH3 marks hyperactive gene promoters in human cancer cells |
GSE58104 |
Congenital scolisis may be associated with both of rare mutation and allele-specific methylation |
GSE58114 |
Gene expression profiles of blood vascular endothelial cells (BECs) in response to larminar shear flow [RNA-Seq] |
GSE58506 |
Genomewide analysis of the human p53 transcriptional network unveils a lncRNA tumor suppressor signature (ChIP-seq) |
GSE58528 |
Genomewide analysis of the human p53 transcriptional network unveils a lncRNA tumor suppressor signature |
GSE59267 |
microRNA profiling of normal testes and testicular germ cell tumors using deep sequencing approach |
GSE60784 |
CGGBP1 inhibits cytosine methylation at repetitive DNA sequences |
GSE61945 |
Human fetal pancreas transcriptome analysis |
GSE61946 |
hESC-derived liver transcriptome analysis |
GSE61947 |
SOX9 targets in hESC-derived pancreatic progenitors |
GSE61948 |
Transcriptome and cistrome analysis reveals synergistic roles for Sox9 and Pdx1 in lineage allocation of foregut progenitor cells |
GSE62428 |
Chip-seq analysis of CHD8 distribution in T47D cells |
GSE62725 |
Targeting of Super-Enhancer-Associated Oncogenic Transcription in MYCN-driven tumor cells by CDK7 inhibition [ChIP-Seq] |
GSE62726 |
Targeting of Super-Enhancer-Associated Oncogenic Transcription in MYCN-driven tumor cells by CDK7 inhibition |
GSE62944 |
Alternatively processed and compiled RNA-Sequencing and clinical data for thousands of samples from The Cancer Genome Atlas |
GSE63602 |
Characterization of a network of tumor suppressor microRNA's in T Cell acute lymphoblastic leukemia |
GSE63979 |
Analysis of long non-coding RNAs highlights tissue-specific expression patterns and epigenetic profiles in normal and psoriatic skin |
GSE63980 |
Transcriptomic studies to characterize the gene expression landscape of psoriasis |
GSE64467 |
ADP-ribose derived Nuclear ATP is Required for Chromatin Remodeling and Hormonal Gene Regulation |
GSE64877 |
Global re-wiring of p53 transcription regulation by the hepatitis B virus X (HBx) protein [ChIP-Seq] |
GSE64878 |
Global re-wiring of p53 transcription regulation by the hepatitis B virus X (HBx) protein |
GSE66601 |
Genome-wide characterization of ARID3B binding sites and KDM4C in ARID3B-knockout OECM1 cells |
GSE66603 |
let-7 controls cancer stemness through ARID3B |
GSE66767 |
Epoxyeicosatrienoic Acids Enhance Haematopoietic Stem and Progenitor Cell Specification and Engraftment |
GSE68058 |
A germline mutation in SRRM2, a splicing factor gene, is implicated in papillary thyroid carcinoma predisposition |
GSE69153 |
RC3H1 posttranscriptionally regulates A20 mRNA and modulates the activity of the IKK/NF-kB pathway |
GSE69233 |
The lncRNA LUST promotes CCICs self-renewal stimulating the wnt/b-catenin signaling activation [RNA-Seq] |
GSE69234 |
The lncRNA LUST promotes CCICs self-renewal stimulating the wnt/b-catenin signaling activation [RIP-Seq] |
GSE69236 |
The lncRNA LUST promotes CCICs self-renewal stimulating the wnt/b-catenin signaling activation |
GSE69319 |
Naïve iPSCs Generated from β-thalassemia Fibroblasts Allow Efficient Gene Correction with CRISPR/Cas9 |
GSE70161 |
Chromatin targets of androgen receptor and PIAS1 in molecular apocrine breast cancer cells [ChIP-seq] |
GSE70163 |
Chromatin targets of androgen receptor and coregulator PIAS1 in molecular apocrine breast cancer cells |
GSE70230 |
The EGF Receptor Ligand Amphiregulin Controls Cell Division via FoxM1 |
GSE71008 |
Plasma extracellular RNA profiles in healthy and cancer patients |
GSE71009 |
LIN28A modulates splicing and gene expression programs in breast cancer cells [RIP-Seq] |
GSE71013 |
LIN28A modulates splicing and gene expression programs in breast cancer cells |
GSE71018 |
Grainyhead-like 2 (GRHL2) maintains the epithelial status of ovarian cancer through miR-200-ZEB1 regulatory networks (ChIP-Seq) |
GSE71019 |
Grainyhead-like 2 (GRHL2) maintains the epithelial status of ovarian cancer through miR-200-ZEB1 regulatory networks |
GSE71976 |
Genome-wide profiling of inflammatory cistrome reveals AP-1/c-Jun as a key regulator of TNFalpha-mediated triple-negative breast cancer progression [ChIP-seq] |
GSE71977 |
Genome-wide profiling of inflammatory cistrome reveals AP-1/c-Jun as a key regulator of TNFalpha-mediated triple-negative breast cancer progression. |
GSE72420 |
The Ro60 Autoantigen Binds Endogenous Retroelements and Regulates Inflammatory Gene Expression |
GSE72502 |
Healthy donor PBMC RNA-seq with or without interferon-alpha stimulation |
GSE73320 |
P21-activated kinase group II small compound inhibitor GNE-2861 perturbs estrogen receptor alpha signaling and restores tamoxifen-sensitivity in breast cancer cells |
GSE73492 |
EWS and FUS Bind a Subset of Transcribed Genes Encoding Proteins Enriched in RNA Regulatory Functions |
GSE73576 |
82-kDa ChAT and SATB1 ChIP-seq after vehicle or amyloid-beta exposure |
GSE74033 |
Estrogen receptor α promotes breast cancer by reprogramming cell metabolism [ChIP-seq] |
GSE74034 |
Estrogen receptor α promotes breast cancer by reprogramming cell metabolism |
GSE74142 |
NAD+ Analog-sensitive PARPs Reveal a Role for PARP-1 in Transcription Elongation |
GSE75115 |
The Promyelocytic Leukemia Zinc Finger Transcription Factor (PLZF) is Critical for Human Endometrial Stromal Cell Decidualization |
GSE75201 |
CHIP-SEQ of FOXA1 in parental MCF7 cells and tamoxifen resistant MCF7 cells |
GSE75329 |
Gene expression profiling of parental and TAMR MCF7 cells after knock-down of ER or FOXA1 or overexpresion of FOXA1 |
GSE75369 |
Gene expression profiling of tamoxifen-resistant breast cancer MCF7L cells |
GSE75372 |
FOXA1 overexpression mediates endocrine resistance by increasing IL-8 in oestrogen receptor-positive breast cancer |
GSE75562 |
Genome-wide analysis of 8-oxoguanine DNA glycosylase-1 |
GSE75719 |
Transcription profiling of neuronal metabolic reprogramming |
GSE75739 |
The role of PRMT5/WDR77 complex in promoting breast cancer oncogenesis [ChIP-Seq] |
GSE75741 |
The role of PRMT5/WDR77 complex in promoting breast cancer oncogenesis [RNA-Seq] |
GSE75742 |
The role of PRMT5/WDR77 complex in promoting breast cancer oncogenesis [RNA-Seq_HPTB] |
GSE75743 |
The role of PRMT5/WDR77 complex in promoting breast cancer oncogenesis |
GSE75941 |
5-hydroxymethylcytosine-mediated alteration of transposon activity associated with Preeclampsia |
GSE76536 |
EPOP interacts with Elongin BC and USP7 to modulate the chromatin landscape (EPOP KO) |
GSE77314 |
RNA-seq of 50 paired hepatocellular carcinoma |
GSE77737 |
Hotspots of aberrant enhancer activity punctuate the colorectal cancer epigenome |
GSE79563 |
PAtCh-Cap: input strategy for improving analysis of ChIP-exo data sets and beyond |
GSE79564 |
Input Strategy for Improving Analysis of ChIP-exo Data and Beyond [RNA-Seq] |
GSE79565 |
Input Strategy for Improving Analysis of ChIP-exo Data and Beyond |
GSE79834 |
ZMYND8 co-localizes with NuRD on target genes and regulates recruitment of GATAD2A/NuRD to sites of DNA damage [ChIP-seq] |
GSE79836 |
ZMYND8 co-localizes with NuRD on target genes and regulates recruitment of GATAD2A/NuRD to sites of DNA damage |
GSE80400 |
Small RNA sequencing of human prostate cancer samples |
GSE81321 |
MEIS2 is a novel oncogenic partner in AML1-ETO positive AML [ChIP-Seq] |
GSE81330 |
MEIS2 is a novel oncogenic partner in AML1-ETO positive AML |
GSE81779 |
ZBTB33 (Kaiso) Differentially Regulates Cell Cycle Through cyclin D1 and cyclin E1 in a Cell Specific Manner [BiSulfite-seq] |
GSE81781 |
ZBTB33 (Kaiso) Differentially Regulates Cell Cycle Through cyclin D1 and cyclin E1 in a Cell Specific Manner [RNA-seq] |
GSE81784 |
ZBTB33 (Kaiso) Differentially Regulates Cell Cycle Through cyclin D1 and cyclin E1 in a Cell Specific Manner |
GSE83107 |
Comparison of human brain and spinal cord neural stem cells (NSCs) |
GSE84583 |
Histone H2A T120 phophorylation promotes oncogenic transformation via upregulation of cyclin D1 [ChIP-seq] |
GSE84968 |
Histone H2A T120 phophorylation promotes oncogenic transformation via upregulation of cyclin D1y |
GSE85094 |
RNA-seq profiling of forced expression of FoxF2 in Benign Prostate Hyperplasia |
GSE86532 |
N-Myc induces an EZH2-mediated transcriptional program driving Neuroendocrine Prostate Cancer |
GSE87774 |
VRTN Regulates the Number of Thoracic Vertebrae During Vertebrate Development [ChIP-seq] |
GSE87776 |
VRTN Regulates the Number of Thoracic Vertebrae During Vertebrate Development |
GSE90045 |
EPOP interacts with Elongin BC and USP7 to modulate the chromatin landscape |
GSE91061 |
Molecular portraits of tumor mutational and micro-environmental sculpting by immune checkpoint blockade therapy |
GSE92735 |
FOXD3 suppresses tumor-initiating features in lung cancer via transcriptional repression of WDR5 and SET |
GSE93323 |
Genome-wide maps of chromatin binding of FOXD3 |
GSE94973 |
Demethylated HSATII DNA and aberrant HSATII RNA foci act as sponges for epigenetic factors in cancer |
GSE95097 |
BAP1 inhibits the ER stress gene regulatory network and modulates metabolic stress response |
GSE95222 |
Identification of enhancer landscape in MDA-MB-231 cells |
GSE95392 |
3alpha-acetonyltabersonine induces glioblastoma apoptosis via the inhibition of DNA damage repair |
GSE97765 |
microRNA expression profile in human Triple-Negative Breast Cancer stem cells |
GSE97851 |
Modeling the pathogenesis of Charcot-Marie-Tooth disease type 1A using patient-specific iPSCs |
GSE98536 |
miRNA expression profile of non-epithelial ovarian tumors |
GSE99274 |
Dynamic bimodal changes in CpG and non-CpG methylation genome-wide upon CGGBP1 loss-of-function |
GSE100639 |
A PAX5-OCT4-PRDM1 Developmental Switch Specifies Human Primordial Germ Cells |
GSE101739 |
Circular RNAs upregulated in medulloblastoma regulate proliferation and growth of tumor cells via host genes |
GSE102410 |
c-Jun/AP-1 overexpression reprograms ERα signaling related to tamoxifen response in ERα-positive breast cancer [ChIP-seq] |
GSE102412 |
ERα and AP-1 coordinate transcription and tamoxifen response in ERα-positive breast cancer |
GSE102945 |
Genome-wide maps of MBD3 binding sites in HEK393T cell |
GSE104247 |
Genome-wide TFBS (Transcription Factor Binding Site) map analysis in HepG2 cells |
GSE104830 |
Global RNA expression of fibromodulin reprogrammed human BJ fibroblasts |
GSE107283 |
VDR ChIP-Seq on colonic human organoids |
GSE108881 |
Histone Modification during MERS-CoV and H5N1 infection |
GSE108882 |
Differential Methylation during MERS-CoV and H5N1 infection |
GSE113238 |
Genome-wide maps of linker histone H1 lysine 85 acetylation in HCT116 cells |
GSE113490 |
Small RNA seq in ALKBH3 stable over expresion and control HeLa cells |
GSE113550 |
Specific Oxylipins Enhance Vertebrate Hematopoiesis via the Receptor GPR132 |
GSE113795 |
Myoepithelial cell perturbations in BRCA mutation carriers and in DCIS (ductal carcinoma in situ) |
GSE113909 |
Myoepithelial cell perturbations in BRCA mutation carriers and in DCIS (ductal carcinoma in situ) |
GSE114133 |
Determination of local chromatin interactions using a combined CRISPR and peroxidase APEX2 system |
GSE114235 |
Exosome release is regulated by mTORC1 via a Rab27A-dependent mechanism |
GSE114703 |
The Replication-initiation determinant protein (RepID) modulates replication by recruiting CUL4 to chromatin |
GSE116787 |
The long non-coding RNA landscape of periodontal ligament stem cells subjected to compressive force |
GSE117164 |
Genome-wide binding of STAT3 or CEBP beta in anaplastic large cell lymphoma |
GSE117838 |
RNA-seq Analysis of U87: Ctrl, U87:EGFR, U87:EGFRvIII, U87:EGFR+EGFRvIII and U87:EGFR+EGFRvIII KRAS KO |
GSE118389 |
Unravelling subclonal heterogeneity and aggressive disease states in TNBC through single-cell RNA-seq [RNA-Seq] |
GSE118390 |
Unravelling subclonal heterogeneity and aggressive disease states in TNBC through single-cell RNA-seq |
GSE118514 |
CRISPR-mediated deletion of prostate cancer risk-associated CTCF loop anchors identifies repressive chromatin loops |
GSE118540 |
Molecular insights into an ancient bone disorder |
GSE119436 |
Interaction between oncogenic FREM2 with IL-1β signaling contributes to esophageal squamous cell carcinoma progression |
GSE119702 |
Effect of Fbxo22 on ER and SRC-3 recruitment to the genomic loci |
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