|
| Status |
Public on Jun 12, 2009 |
| Title |
memory-CD8-TCM-H3K4me3 |
| Sample type |
SRA |
| |
|
| Source name |
TCM H3K4me3
|
| Organism |
Homo sapiens |
| Characteristics |
memory CD8 T cells
|
| Treatment protocol |
Treatment protocol as described in Araki et al., 2008
|
| Growth protocol |
Growth protocol as described in Araki et al., 2008
|
| Extracted molecule |
genomic DNA |
| Extraction protocol |
Extract protocol as described in Araki et al., 2008
|
| |
|
| Library strategy |
ChIP-Seq |
| Library source |
genomic |
| Library selection |
ChIP |
| Instrument model |
Illumina Genome Analyzer |
| |
|
| Description |
Chromatin IP against H3K4me3
run42_lane2
|
| Data processing |
Sequence reads were obtained and mapped to the human (March, 2006) genomes using the Illumina Genome Analyzer Pipeline. More details as described in Araki et al., 2008
|
| |
|
| Submission date |
Aug 29, 2008 |
| Last update date |
May 15, 2019 |
| Contact name |
Chongzhi Zang |
| Organization name |
University of Virginia
|
| Street address |
P. O. Box 800717
|
| City |
Charlottesville |
| State/province |
VA |
| ZIP/Postal code |
22908 |
| Country |
USA |
| |
|
| Platform ID |
GPL9052 |
| Series (1) |
| GSE12616 |
Genome-wide Analysis of Histone Methylations in Memory CD8+ T Cells |
|
| Relations |
| SRA |
SRX005386 |
| BioSample |
SAMN02195214 |
| Named Annotation |
GSM315955_memory-CD8-TCM-H3K4me3.bed.gz |
