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GEO help: Mouse over screen elements for information. |
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| Status |
Public on Aug 26, 2013 |
| Title |
Illumina HiSeq 2500 (Zea mays) |
| Technology type |
high-throughput sequencing |
| Distribution |
virtual |
| Organism |
Zea mays |
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| Submission date |
Aug 26, 2013 |
| Last update date |
Dec 28, 2018 |
| Contact name |
GEO |
| Country |
USA |
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| Samples (2014)
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GSM1215320, GSM1215321, GSM1215322, GSM1215323, GSM1215324, GSM1215325
GSM1215326, GSM1215327, GSM1215328, GSM1215329, GSM1215330, GSM1215331, GSM1215332, GSM1215333, GSM1215334, GSM1215335, GSM1215336, GSM1215337, GSM1215338, GSM1215339, GSM1215340, GSM1215341, GSM1215342, GSM1215343, GSM1215344, GSM1215345, GSM1215346, GSM1215347, GSM1215348, GSM1215349, GSM1215350, GSM1215351, GSM1215352, GSM1215353, GSM1215354, GSM1215355, GSM1215356, GSM1215357, GSM1215358, GSM1215359, GSM1215360, GSM1215361, GSM1215362, GSM1215363, GSM1215364, GSM1215365, GSM1215366, GSM1215367, GSM1215368, GSM1215369, GSM1215370, GSM1215371, GSM1215372, GSM1215373, GSM1215374, GSM1215375, GSM1215376, GSM1215377, GSM1215378, GSM1215379, GSM1215380, GSM1215381, GSM1215382, GSM1215383, GSM1215384, GSM1215385, GSM1215386, GSM1215387, GSM1379718, GSM1379719, GSM1379720, GSM1379721, GSM1379722, GSM1379723, GSM1379724, GSM1379725, GSM1379726, GSM1379727, GSM1379728, GSM1379729, GSM1379730, GSM1379731, GSM1379732, GSM1379733, GSM1379734, GSM1379735, GSM1379736, GSM1379737, GSM1379738, GSM1379739, GSM1379740, GSM1379741, GSM1379742, GSM1379743, GSM1379744, GSM1379745, GSM1379746, GSM1379747, GSM1379748, GSM1379749, GSM1379750, GSM1379751, GSM1379752, GSM1379753, GSM1379754, GSM1379755, GSM1379756, GSM1379757, GSM1379758, GSM1379759, GSM1379760, GSM1379761, GSM1379762, GSM1379763, GSM1379764, GSM1379765, GSM1379766, GSM1379767, GSM1379768, GSM1379769, GSM1379770, GSM1379771, GSM1379772, GSM1379773, GSM1379774, GSM1379775, GSM1379776, GSM1379777, GSM1379778, GSM1379779, GSM1379780, GSM1379781, GSM1379782, GSM1379783, GSM1379784, GSM1379785, GSM1379786, GSM1379787, GSM1379788, GSM1379789, GSM1379790, GSM1379791, GSM1379792, GSM1379793, GSM1379794, GSM1379795, GSM1379796, GSM1379797, GSM1379798, GSM1379799, GSM1379800, GSM1379801, GSM1379802, GSM1379803, GSM1379804, GSM1379805, GSM1379806, GSM1379807, GSM1379808, GSM1379809, GSM1379810, GSM1379811, GSM1496049, GSM1496050, GSM1496051, GSM1496052, GSM1496053, GSM1496054, GSM1496055, GSM1496056, GSM1496057, GSM1496058, GSM1496059, GSM1496060, GSM1515454, GSM1515455, GSM1557006, GSM1557007, GSM1557008, GSM1557009, GSM1557010, GSM1557011, GSM1557012, GSM1557013, GSM1638306, GSM1638307, GSM1638578, GSM1638579, GSM1638580, GSM1638581, GSM1649386, GSM1649387, GSM1652858, GSM1652859, GSM1652860, GSM1652861, GSM1652862, GSM1652863, GSM1652864, GSM1652865, GSM1652866, GSM1652867, GSM1652868, GSM1652869, GSM1652870, GSM1652871, GSM1652872, GSM1652873, GSM1652874, GSM1652875, GSM1652876, GSM1652877, GSM1652878, GSM1652879, GSM1652880, GSM1652881, GSM1652882, GSM1652883, GSM1652884, GSM1652885, GSM1652886, GSM1652887, GSM1652888, GSM1652889, GSM1652890, GSM1652891, GSM1652892, GSM1652893, GSM1652894, GSM1652895, GSM1652896, GSM1652897, GSM1652898, GSM1652899, GSM1652900, GSM1652901, GSM1652902, GSM1652903, GSM1652904, GSM1652905, GSM1708738, GSM1708739, GSM1708740, GSM1708741, GSM1708742, GSM1708743, GSM1708744, GSM1708745, GSM1708746, GSM1708747, GSM1708748, GSM1708749, GSM1708750, GSM1708751, GSM1708752, GSM1708753, GSM1708754, GSM1708755, GSM1843740, GSM1843741, GSM1843742, GSM1843743, GSM1843744, GSM1843745, GSM1843746, GSM1843747, GSM1843748, GSM1843749, GSM1843750, GSM1843751, GSM1843752, GSM1843753, GSM1843754, GSM1843755, GSM1843756, GSM1843757, GSM1843758, GSM1843759, GSM1843760, GSM1843761, GSM1843762, GSM1843763, GSM1843764, GSM1843765, GSM1843766, GSM1843767, GSM1843768, GSM1843769, GSM1843770, GSM1843771, GSM1843772, GSM1843773, GSM1843774, GSM1843775, GSM1843776, GSM1843777, GSM1843778, GSM1843779, GSM1843780, GSM1843781, GSM1843782, GSM1843783, GSM1843784, GSM1843785, GSM1843786, GSM1843787, GSM1843788, GSM1843789, GSM1843790, GSM1843791, GSM1843792, GSM1843793, GSM1843794, GSM1843795, GSM1843796, GSM1843797, GSM1843798, GSM1843799, GSM1843800, GSM1843801, GSM1843802, GSM1843803, GSM1843804, GSM1843805, GSM1843806, GSM1843807, GSM1843808, GSM1843809, GSM1843810, GSM1843811, GSM1843812, GSM1843813, GSM1843814, GSM1843815, GSM1843816, GSM1843817, GSM1843818, GSM1843819, GSM1843820, GSM1843821, GSM1843822, GSM1843823, GSM1843824, GSM1843825, GSM1843826, GSM1843827, GSM1843828, GSM1843829, GSM1843830, GSM1843831, GSM1843832, GSM1843833, GSM1925000, GSM2038163, GSM2038164, GSM2038165, GSM2038166, GSM2038167, GSM2038168, GSM2055763, GSM2055764, GSM2055765, GSM2055766, GSM2055767, GSM2055768, GSM2055769, GSM2055770, GSM2055771, GSM2055772, GSM2096531, GSM2096532, GSM2096533, GSM2096534, GSM2096535, GSM2096536, GSM2096537, GSM2096538, GSM2096539, GSM2096540, GSM2096541, GSM2096542, GSM2112631, GSM2112632, GSM2140310, GSM2140311, GSM2140312, GSM2140313, GSM2140314, GSM2140315, GSM2155548, GSM2415843, GSM2415844, GSM2415845, GSM2415846, GSM2415847, GSM2415848, GSM2415849, GSM2415850, GSM2415851, GSM2415852, GSM2415853, GSM2415854, GSM2415855, GSM2415856, GSM2415857, GSM2415858, GSM2415859, GSM2415860, GSM2471768, GSM2471769, GSM2471770, GSM2471771, GSM2471772, GSM2471773, GSM2471774, GSM2471775, GSM2471776, GSM2471777, GSM2471778, GSM2471779, GSM2471780, GSM2471781, GSM2471782, GSM2471783, GSM2471784, GSM2471785, GSM2471786, GSM2472407, GSM2472408, GSM2472409, GSM2472410, GSM2472411, GSM2472412, GSM2480918, GSM2480919, GSM2480920, GSM2495030, GSM2495031, GSM2495032, GSM2495033, GSM2495034, GSM2495035, GSM2509800, GSM2509801, GSM2509802, GSM2509803, GSM2509804, GSM2509805, GSM2509806, GSM2509807, GSM2509808, GSM2509809, GSM2509810, GSM2509811, GSM2509812, GSM2509813, GSM2509814, GSM2509815, GSM2509816, GSM2509817, GSM2509818, GSM2509819, GSM2509820, GSM2509821, GSM2509822, GSM2509823, GSM2509824, GSM2509825, GSM2509826, GSM2509827, GSM2509828, GSM2509829, GSM2509830, GSM2509831, GSM2509832, GSM2509833, GSM2509834, GSM2509835, GSM2509836, GSM2509837, GSM2509838, GSM2509839, GSM2509840, GSM2509841, GSM2509842, GSM2509843, GSM2509844, GSM2509845, GSM2509846, GSM2509847, GSM2525640, GSM2525641, GSM2564304, GSM2564305, GSM2649091, GSM2649092, GSM2649093, GSM2649094, GSM2671530, GSM2671531...
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| Series (95)
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| GSE50191 |
Maize proteome and transcriptome atlas |
| GSE57337 |
Genome-wide analysis of alternative splicing in Zea mays: landscape and genetic regulation |
| GSE60141 |
A Comprehensive Atlas of Arabidopsis Regulatory DNA [DAP-seq] |
| GSE60143 |
In vitro, genomic context identification of transcription factor binding sites |
| GSE61057 |
The naked endosperm genes encode duplicate ID domain transcription factors required for maize endosperm differentiation |
| GSE61830 |
Next Generation Sequencing Facilitates Quantitative Analysis of Wild Type and opaque2 mutant Transcriptomes |
| GSE63779 |
The maize genome encodes novel members of the purple acid phosphatase (PAP) subgroup Ia |
| GSE67080 |
Next Generation Sequencing Facilitates Quantitative Analysis of Wild Type and rea1 mutant Transcriptomes |
| GSE67083 |
Next Generation Sequencing Facilitates Quantitative Analysis of Wild Type and rea1 mutant total and polysome-bound Transcriptomes |
| GSE67103 |
Suppressed 60S ribosome exportation in maize ribosome export associated 1 mutant triggers inconsistent transcriptional and translational regulations |
| GSE67551 |
Comparative histone modification profiling revealed developmentally regulated acetylation on upstream promoters of C4 genes and potential C4 regulators |
| GSE67655 |
Temporal Shift of Circadian-Mediated Gene Expression and Carbon Fixation Contributes to Biomass Heterosis in Maize Hybrids |
| GSE69784 |
Identification of temporal regulatory modules associated with proliferation and differentiation in early maize endosperm development |
| GSE71723 |
Genome-wide analysis of alternative splicing during development and drought in Zea mays |
| GSE76800 |
Next Generation Sequencing Facilitates Quantitative Analysis of Wild Type and IFC （incompletely fused carpels） Maize Ovary Transcriptomes |
| GSE77657 |
Reference annotation for small RNA-producing genes in maize |
| GSE79513 |
Next Generation Sequencing Facilitates Quantitative Analysis of Transcriptomes for Wild Type and Mutants including opaque2, PbfRNAi and PbfRNAi;o2 in Maize (Zea mays) |
| GSE80091 |
Next Generation Sequencing Facilitates Quantitative Analysis of Wild Type and dek10 mutant Transcriptomes |
| GSE80250 |
Next Generation Sequencing Facilitates Quantitative Analysis of Wild Type and dek33 mutant Transcriptomes |
| GSE80998 |
Incompletely fused carpels ovary development revealed by miRNAs and target genes analysis in maize. (smallRNA-Seq and degradome-Seq) |
| GSE85516 |
Diversification of Root Hair Development Genes in Vascular Plants |
| GSE90849 |
Characterization of small RNAs and genes in maize anthers (ms23 sterile) |
| GSE94251 |
Genome-wide identification of H3K9ac enriched regions in inner stem tissue of V2 seedlings and husks (maize B73) [ChIP-Seq] |
| GSE94252 |
Genome-wide gene expression profile in inner stem tissue of V2 seedlings and husks (maize B73) [RNA-Seq] |
| GSE94254 |
Inner stem tissue of V2 seedlings and husks (maize B73) |
| GSE94291 |
Genome-wide chromatin accessibility profiling in maize using DNase-seq on two different tissues: inner stem tissue of V2 seedlings and husk |
| GSE95039 |
Next Generation Sequencing Analysis of Wild Type and fl3 Transcriptomes in 10DAP(day after pollination) endosperm |
| GSE95399 |
Sequential gene activation and extensive gene imprinting during early embryo development in maize |
| GSE95769 |
Next Generation Sequencing Facilitates Quantitative Analysis of Wild Type (WT) and dek37 mutant Transcriptomes |
| GSE97422 |
Next Generation Sequencing Facilitates Quantitative Analysis of WT and o11 mutant Transcriptomes |
| GSE99638 |
Low-nitrogen stress reduces cell flux and cell elongation rate in maize leaf via reducing GA synthesis |
| GSE100121 |
Maize transcriptional responses to specialist and generalist spider mite herbivores |
| GSE100667 |
Transcriptome analysis of Htn1 mediated resistance against E .turcium |
| GSE101943 |
Control of maize vegetative and reproductive development, fertility and rRNAs silencing by HISTONE DEACETYLASE 108 |
| GSE102036 |
Control of maize vegetative and reproductive development, fertility and rRNAs silencing by HISTONE DEACETYLASE 108 [PMeA and MiA] |
| GSE102051 |
Genome-wide characterization of cis-acting DNA targets of Opaque11 in maize |
| GSE105780 |
Decrease in DNA methylation 1(DDM1) is required for the establishement of CHH islands in maize |
| GSE107562 |
A RNA-Seq Analysis of the Response of Photosynthetic System to Low Nitrogen Supply in Maize Leaf |
| GSE109644 |
Pathogen Trojan horse delivers bioactive host protein ZmMAC1 to alter maize (Zea mays) anther cell behavior in the male sterile mutant Zmmac1-1. |
| GSE110315 |
eQTL analysis of 5 DAP maize kernel |
| GSE111425 |
Gibberellins synthesis is involved in the reduction of cell flux and elemental growth rate in maize leaf under low nitrogen supply |
| GSE112917 |
Genome-wide characterization of cis-acting DNA targets of ZmbZIP22 in maize |
| GSE113048 |
Next Generation Sequencing Facilitates Quantitative Analysis of WT and zmbzip22 mutant Transcriptomes |
| GSE114343 |
Opaque-2 regulates a complex gene network associated with cell differentiation and storage function of maize endosperm |
| GSE114758 |
RNA polymerase mapping in plants identifies enhancers enriched in causal variants |
| GSE116496 |
Transcriptional responses of inbred lines B73, B75 and B96 and resulting F1 lines to herbivory by Tetranychus urticae |
| GSE118427 |
Phytoplasma SAP11 homologs differentially modulate development and defence in Arabidopsis and maize via destabilization of specific TCPs |
| GSE118498 |
Next Generation Sequencing Facilitates Quantitative Analysis of WT and dek42 mutant Transcriptomes |
| GSE120304 |
Widespread Long-range Cis-Regulatory Elements in the Maize Genome |
| GSE120674 |
Next Generation Sequencing Facilitates Quantitative Analysis of WT and dek15 mutant Transcriptomes |
| GSE121039 |
Defining the developmental program leading to meiosis in maize |
| GSE122449 |
Transcriptome and sRNA profiling of Maize dcl5 CRISPR null alleles |
| GSE122477 |
Genome-Wide Identification and Characterization of microRNAs responding to ABA and GA in maize embryos during seed germination |
| GSE123164 |
Single-cell type transcriptome analysis of maize roothair |
| GSE124245 |
RNA-Seq from zmknl1 and WT kernels at 14 DAP (day after pollination) with each two independent biological replicates |
| GSE126949 |
Next Generation Sequencing Facilitates Quantitative Analysis of Wild Type and dek44 mutant Transcriptomes |
| GSE128002 |
Response to extended drought stress and recovery involve epigenetic control of stress adaptation and flowering regulation in Zea mays |
| GSE128432 |
Transcriptomes of maize seedlings under water and salinity treatment |
| GSE132167 |
Abscisic acid transcriptional response of the maize epigenetic mutant, mop1-1 |
| GSE134936 |
Magnitude of modulation of gene expression in aneuploid maize depends on the extent of genomic imbalance |
| GSE136087 |
Comparative transcriptomes analysis at different developmental stages of seed embryo in maize by RNA-sequencing |
| GSE136685 |
The regulatory landscape of early maize inflorescence development |
| GSE137701 |
Back-spliced RNA from Retrotransposon Binds to Centromere and Regulates Centromeric Chromatin Loops in Maize |
| GSE141768 |
Brassinosteroids application affects maize growth and gravitropic response by regulating gene expression in roots, shoots and leaves |
| GSE141860 |
Nitrate and ammonium affect the overall maize response to nitrogen availability by triggering specific and common transcriptional signatures in root |
| GSE145586 |
Evolutionary and functional genomics of DNA methylation in maize domestication and improvement |
| GSE147576 |
Tissue-dependent regulation of miRNA activity |
| GSE148762 |
Small RNAs in monocots |
| GSE150929 |
Stable unmethylated DNA demarcates expressed genes and their cis-regulatory space in plant genomes |
| GSE155296 |
Next Generation Sequencing Analysis of Maize Wild Type (WT) and thk1 Mutants Transcriptomes |
| GSE156973 |
Evaluation of commercially available small RNA methods for plant samples |
| GSE159408 |
Transcriptomes of maize leaf sheath tissues in wild-type and lncRNA GARR2 knockout lines |
| GSE159634 |
Transcriptomes of maize seedlings in wild-type and Gβ knockout lines. |
| GSE162678 |
maize DDM1 targets RNA-directed DNA methylation on active chromatin |
| GSE168384 |
Nitrogen fixation and mucilage production on maize aerial roots is controlled by aerial root development and border cell functions |
| GSE172302 |
Ground tissue circuitry regulates organ complexity in monocot roots |
| GSE173087 |
Ground tissue circuitry regulates organ complexity in monocot roots [root meristem scRNA-seq] |
| GSE173102 |
Nitrate regulates maize root transcriptome through nitric oxide dependent and independent mechanisms |
| GSE175630 |
Degradome-seq of maize |
| GSE175915 |
bHLH cascade regulate 24-nt phasiRNA biogenesis in maize anther |
| GSE179997 |
Genetic Networks of Bract Suppression in Maize |
| GSE183422 |
Beyond the protoplast: isolating and analyzing fixed cells for plant single-cell research |
| GSE188626 |
Transcriptional analysis of maize leaf tissue treated with seaweed extract under drought stress |
| GSE193292 |
Identification of the potential genes regulating seed germination speed in maize |
| GSE196738 |
Identification of miRNAs and their target genes associated with improved corn seed vigor induced by gibberellin (GA3) through small RNAs and degradome sequencing |
| GSE202269 |
Transcriptome analysis of nkd1 and nkd2 mutants in W22 maize endosperm |
| GSE206002 |
Chromatin state for BS and M cells |
| GSE219091 |
The establishment of the anther somatic niche with single cell sequencing |
| GSE221594 |
Characterization and transcriptome analysis of maize small kernel mutant smk7a in different development stages |
| GSE223667 |
Effect of drought stress on gene expression of maize leaves |
| GSE223823 |
Integrative analysis of transcriptome, microRNA-seq and metabolome reveals an essential role of exogenous melatonin in enhancing salt stress tolerance during seed germination in maize [miRNA-seq] |
| GSE223824 |
Integrative analysis of transcriptome, microRNA-seq and metabolome reveals an essential role of exogenous melatonin in enhancing salt stress tolerance during seed germination in maize |
| GSE229138 |
Gene Editing of Gibberellin-Oxidase20 improves plant architecture and drought tolerance in maize |
| GSE247798 |
Identification and profiling of microRNAs in Zea mays in response to Spodoptera frugiperda feeding |
| GSE247976 |
Whole transcriptome analysis of coding and non-coding RNAs associated with Spodoptera frugiperda feeding in Zea mays |
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| Supplementary data files not provided |
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