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| Status |
Public on Jan 28, 2015 |
| Title |
The naked endosperm genes encode duplicate ID domain transcription factors required for maize endosperm differentiation |
| Organism |
Zea mays |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
The objective of the current study is to unravel the gene regulatory networks controlled by the nkd genes during maize endosperm developent. We compared wild type (B73) vs. nkd mutant (introgressed into B73 background) transcriptomes in aleurone vs. starchy endosperm cell types captured by laser capture microdissection technology.
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| Overall design |
We performed RNA seq analysis of mid-mature (15DAP) endosperm in two cell types [aleurone (A) and starchy endosperm (S)] of wild type B73 (B) and nkd mutant (N) kernels with three independent biological replicates.
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| Contributor(s) |
Neelakandan AK, Gontarek B, Yi G, Vollbrecht E, Becraft PW |
| Citation(s) |
25552497, 27895224 |
| |
| Submission date |
Sep 03, 2014 |
| Last update date |
May 15, 2019 |
| Contact name |
Philip W Becraft |
| Organization name |
Iowa State University
|
| Department |
Genetics, Development and Cell Biology
|
| Lab |
2188
|
| Street address |
Molecular Biology Building
|
| City |
Ames |
| State/province |
IA |
| ZIP/Postal code |
50011 |
| Country |
USA |
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| Platforms (1) |
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| Samples (12)
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| Relations |
| BioProject |
PRJNA260183 |
| SRA |
SRP046270 |
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