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Series GSE61830 Query DataSets for GSE61830
Status Public on Oct 15, 2014
Title Next Generation Sequencing Facilitates Quantitative Analysis of Wild Type and opaque2 mutant Transcriptomes
Organism Zea mays
Experiment type Expression profiling by high throughput sequencing
Summary Analysis of gene expression level. The hypothesis tested in the present study was that opaque2 mutant influence the expression of storage proteins. Results provide important information of the gene expression level regulation of storage proteins and other biological processes.
 
Overall design Endosperm mRNA profiles of 15DAP wild type (WT) and opaque2 mutant were generated by deep sequencing, in triplicate, using Illumina Hiseq 2500 (Zea mays).
 
Contributor(s) Qi W, Qiao Z
Citation(s) 25691733
Submission date Sep 29, 2014
Last update date May 15, 2019
Contact name Weiwei Qi
E-mail(s) weiweiqi@shu.edu.cn
Organization name Shanghai University
Street address 333 Nanchen Road
City Shanghai
ZIP/Postal code 200444
Country China
 
Platforms (1)
GPL17628 Illumina HiSeq 2500 (Zea mays)
Samples (2)
GSM1515454 opaque2 mutant
GSM1515455 wild type
Relations
BioProject PRJNA262503
SRA SRP048204

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE61830_RAW.tar 1.2 Mb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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