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Status |
Public on Nov 12, 2010 |
Title |
Illumina Genome Analyzer IIx (Drosophila melanogaster) |
Technology type |
high-throughput sequencing |
Distribution |
virtual |
Organism |
Drosophila melanogaster |
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Submission date |
Nov 12, 2010 |
Last update date |
Mar 04, 2014 |
Contact name |
GEO |
Country |
USA |
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Samples (1561)
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GSM622678, GSM622679, GSM622680, GSM622681, GSM622682, GSM622683
GSM622684, GSM622685, GSM622686, GSM622687, GSM622688, GSM622689, GSM622690, GSM622691, GSM622692, GSM622693, GSM622694, GSM622695, GSM622696, GSM622697, GSM622698, GSM622699, GSM622700, GSM622701, GSM622702, GSM622703, GSM622704, GSM622705, GSM622706, GSM622707, GSM622708, GSM622709, GSM674118, GSM674119, GSM674120, GSM674121, GSM674122, GSM674123, GSM674124, GSM674125, GSM741896, GSM741897, GSM741898, GSM741899, GSM741900, GSM741901, GSM741902, GSM741903, GSM741904, GSM741905, GSM741906, GSM741907, GSM741908, GSM741909, GSM741910, GSM741911, GSM741912, GSM741913, GSM741914, GSM741915, GSM741916, GSM741917, GSM741918, GSM741919, GSM763060, GSM763061, GSM763062, GSM764316, GSM764317, GSM764318, GSM764319, GSM767963, GSM767964, GSM773332, GSM773333, GSM773334, GSM773335, GSM773336, GSM773337, GSM773338, GSM773339, GSM773340, GSM773341, GSM773342, GSM773343, GSM773344, GSM773345, GSM774083, GSM774084, GSM794483, GSM794484, GSM794485, GSM794486, GSM794487, GSM794488, GSM796328, GSM796329, GSM796330, GSM796331, GSM796332, GSM796333, GSM796334, GSM796338, GSM796339, GSM796340, GSM828158, GSM828159, GSM828160, GSM829665, GSM829666, GSM829667, GSM829668, GSM829669, GSM829670, GSM829671, GSM829672, GSM829673, GSM829674, GSM829675, GSM829676, GSM829677, GSM829678, GSM829679, GSM829680, GSM829681, GSM829682, GSM829683, GSM829684, GSM829685, GSM829686, GSM829687, GSM829688, GSM830470, GSM833473, GSM833474, GSM833475, GSM833476, GSM833477, GSM838746, GSM838747, GSM838748, GSM838749, GSM838750, GSM838751, GSM838752, GSM838753, GSM838754, GSM838755, GSM838756, GSM838757, GSM846269, GSM846270, GSM846271, GSM846272, GSM846273, GSM846274, GSM846275, GSM846276, GSM846277, GSM846278, GSM846279, GSM846280, GSM846281, GSM846338, GSM846902, GSM846903, GSM846904, GSM846905, GSM846906, GSM846907, GSM846908, GSM846909, GSM846910, GSM846911, GSM846912, GSM846913, GSM846914, GSM846915, GSM846916, GSM846917, GSM846918, GSM846919, GSM846920, GSM846921, GSM846922, GSM846923, GSM846924, GSM846925, GSM846926, GSM846927, GSM846928, GSM846929, GSM846930, GSM846931, GSM846932, GSM846933, GSM846934, GSM846935, GSM846936, GSM846937, GSM846938, GSM846939, GSM846940, GSM846941, GSM846942, GSM846943, GSM846944, GSM846945, GSM846946, GSM848929, GSM854158, GSM854159, GSM875498, GSM875499, GSM875500, GSM875501, GSM883797, GSM883798, GSM886795, GSM886796, GSM886797, GSM886798, GSM886799, GSM886800, GSM892447, GSM892448, GSM892449, GSM892450, GSM928372, GSM928373, GSM928374, GSM928375, GSM928376, GSM928377, GSM928378, GSM928379, GSM934836, GSM942043, GSM942044, GSM953478, GSM953479, GSM953480, GSM953481, GSM978991, GSM978992, GSM987859, GSM994678, GSM994679, GSM994680, GSM994681, GSM994682, GSM994683, GSM994684, GSM994685, GSM994686, GSM994687, GSM994688, GSM994689, GSM994690, GSM994691, GSM994692, GSM994693, GSM994694, GSM994695, GSM994696, GSM994697, GSM994698, GSM994699, GSM994700, GSM994701, GSM998948, GSM998949, GSM998950, GSM998951, GSM998952, GSM998953, GSM998954, GSM998955, GSM998956, GSM998957, GSM1000400, GSM1000401, GSM1000402, GSM1000403, GSM1000404, GSM1000405, GSM1000406, GSM1000407, GSM1000408, GSM1000409, GSM1000410, GSM1000411, GSM1000609, GSM1000610, GSM1018446, GSM1018447, GSM1018448, GSM1018449, GSM1018450, GSM1018451, GSM1022624, GSM1022889, GSM1022890, GSM1022891, GSM1022892, GSM1022893, GSM1022894, GSM1022895, GSM1022896, GSM1022897, GSM1022898, GSM1022899, GSM1022900, GSM1022901, GSM1022902, GSM1022903, GSM1022904, GSM1022905, GSM1022906, GSM1022907, GSM1022908, GSM1022909, GSM1022910, GSM1022911, GSM1022912, GSM1022913, GSM1027405, GSM1070027, GSM1070028, GSM1070029, GSM1070033, GSM1070034, GSM1070035, GSM1070036, GSM1070037, GSM1070038, GSM1070042, GSM1070043, GSM1088966, GSM1088967, GSM1088968, GSM1088969, GSM1088970, GSM1088971, GSM1088972, GSM1088973, GSM1098477, GSM1098478, GSM1098479, GSM1098480, GSM1098481, GSM1098482, GSM1098483, GSM1100827, GSM1100828, GSM1100829, GSM1100830, GSM1100831, GSM1100832, GSM1100833, GSM1100834, GSM1100835, GSM1100836, GSM1100837, GSM1100838, GSM1100839, GSM1100840, GSM1100841, GSM1100842, GSM1119285, GSM1133262, GSM1133263, GSM1133264, GSM1133265, GSM1186462, GSM1186464, GSM1186465, GSM1193420, GSM1193421, GSM1193422, GSM1193423, GSM1193424, GSM1193425, GSM1193426, GSM1193427, GSM1193428, GSM1193810, GSM1193811, GSM1193812, GSM1193813, GSM1193814, GSM1193815, GSM1193816, GSM1207488, GSM1207489, GSM1207490, GSM1220611, GSM1220612, GSM1220613, GSM1220614, GSM1220615, GSM1220616, GSM1220617, GSM1220618, GSM1220619, GSM1220620, GSM1220621, GSM1220622, GSM1220623, GSM1220624, GSM1220625, GSM1220626, GSM1220627, GSM1220628, GSM1220629, GSM1220630, GSM1220631, GSM1220632, GSM1220633, GSM1220634, GSM1220635, GSM1220636, GSM1220637, GSM1220638, GSM1220639, GSM1220640, GSM1220641, GSM1220642, GSM1220643, GSM1220644, GSM1220645, GSM1220646, GSM1220647, GSM1220648, GSM1220649, GSM1245025, GSM1245026, GSM1245027, GSM1245028, GSM1245029, GSM1245030, GSM1248971, GSM1248972, GSM1248973, GSM1248974, GSM1248975, GSM1248976, GSM1252662, GSM1252663, GSM1252664, GSM1267494, GSM1278389, GSM1278390, GSM1278391, GSM1280457, GSM1280458, GSM1280459, GSM1280460, GSM1306660, GSM1306661, GSM1306662, GSM1306663, GSM1306664, GSM1306665, GSM1319826, GSM1319827, GSM1319828, GSM1319829, GSM1319830, GSM1319831, GSM1319832, GSM1319833, GSM1319834, GSM1319835, GSM1319836, GSM1319837, GSM1319838, GSM1319839, GSM1319840, GSM1329036, GSM1329037, GSM1329038, GSM1329039, GSM1329040, GSM1329041, GSM1329042, GSM1329043, GSM1366520, GSM1366521, GSM1373329, GSM1373330, GSM1373331, GSM1373332, GSM1373333, GSM1373334, GSM1397685, GSM1397686, GSM1397687, GSM1397688, GSM1397689... Accession list truncated, click here to browse through all related public accessions You can also download a list of all accessions here
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Series (114)
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GSE23543 |
GRO-seq in Drosophila melanogaster S2 cells |
GSE23544 |
Comparison of GRO-seq with Pol II (Rpb3) ChIP-seq in Drosophila melanogaster S2 cells |
GSE25312 |
High-througput Bacteria one hybrid (B1H) selections for all Drosophila homeodomain proteins |
GSE27269 |
Identifying targets of DSX with DamID-seq |
GSE28180 |
The Genomic Binding Sites of an Endogenous Non-Coding RNA |
GSE29972 |
Deep sequencing the circadian transcriptome of Drosophila brain |
GSE30757 |
Zelda binding in the early Drosophila melanogaster embryo marks regions subsequently activated at the maternal-to-zygotic transition |
GSE30820 |
Chromatin maps of the Drosophila melanogaster TrxG protein Ash1 and FSH |
GSE30997 |
[E-MTAB-652] CID island ChIP |
GSE31194 |
Parallel high-throughput RNA-sequencing suggests little overlap of differential gene expression between knockout of TDP-43 and its over-expression in central nervous system in Drosophila |
GSE31226 |
Heat-shock protein 90 globally targets paused promoters and regulates environment-induced gene expression |
GSE32038 |
Differential Gene and Transcript Expression Analysis with TopHat and Cufflinks |
GSE32120 |
The little elongation complex (LEC) regulates small nuclear RNA transcription |
GSE32329 |
Whole genome expression analysis in the third-instar larval midgut of Drosophila melanogaster |
GSE33475 |
The exon junction complex is restricted to a specific subset of splice junctions |
GSE33546 |
Polycomb repressive complex 2-dependent and -independent functions of Jarid2 in transcriptional regulation in Drosophila [ChIP-Seq] |
GSE33595 |
The mosquito Aedes aegypti has a large genome size and high transposable element load but contains a low proportion of transposon-specific piRNAs |
GSE33905 |
Identification of polyA sites in Drosophila melanogaster |
GSE34281 |
Poised RNA Polymerase II changes over developmental time and prepares genes for future expression (RNA-seq data) |
GSE34283 |
Poised RNA Polymerase II changes over developmental time and prepares genes for future expression (MNase-seq data) |
GSE34301 |
Poised RNA Polymerase II changes over developmental time and prepares genes for future expression (ChIP-seq data) |
GSE34304 |
Poised RNA Polymerase II changes over developmental time and prepares genes for future expression |
GSE34425 |
The methylome of Drosophila melanogaster |
GSE34728 |
The tudor domain protein Kumo is required to assemble the nuage and to generate germline piRNAs in Drosophila |
GSE35812 |
Radicicol treatment of Drosophila cells |
GSE36039 |
Polycomb repressive complex 2-dependent and –independent functions of Jarid2 in transcriptional regulation in Drosophila |
GSE36212 |
Promoter activity profiling throughout the Drosophila life cycle reveals role of transposons in regulatory innovation |
GSE36213 |
Profiling of transcription start site expression in Drosophila and the human K562 cell line using RAMPAGE |
GSE36310 |
Tissue specific Pol II Chip-Seq in the early fly embryo |
GSE36404 |
Generation of chromatin maps for ASH1 and FSH applying ChIP-seq |
GSE36450 |
The BET protein FSH functionally interacts with ASH1 to orchestrate global gene activity in Drosophila |
GSE37811 |
mRNA-Seq of head tissue from Doa and fne mutants, Drosophila melanogaster. |
GSE38435 |
New partners in regulation of gene expression: the Enhancer of Trithorax and Polycomb Corto interacts with methylated Ribosomal Protein L12 via its chromodomain. |
GSE38998 |
RNA sequencing in fly heads to examine the effect of spermidine feeding on transcription in the ageing fly brain. |
GSE39782 |
Tag-seq profiling in eye-antennal and wing imaginal discs of D. melanogaster, D. yakuba and D. virilis |
GSE39784 |
Tag-seq in eye-antennal and wing imaginal discs of D.melanogaster, D.yakuba, and D.virilis; RNA-seq in wild-type and glass mutant D.melanogaster eye-antennal imaginal discs. |
GSE40467 |
cis-Regulatory Requirements for Tissue-Specific Programs of the Circadian Clock |
GSE40664 |
Identification of transcription factor binding sites from ChIP-seq data at high-resolution |
GSE40739 |
Genome-wide quantitative enhancer activity maps identified by STARR-seq |
GSE40748 |
A user-friendly chromatographic method to purify small regulatory RNAs |
GSE41510 |
Transcriptome analysis of Drosophila CNS midline cells reveals diverse peptidergic properties and a role for castor in neuronal differentiation |
GSE41686 |
A global change in RNA Polymerase II pausing during the Drosophila midblastula transition [MNase-seq] |
GSE41700 |
A global change in RNA Polymerase II pausing during the Drosophila midblastula transition [ChIP-seq] |
GSE41703 |
A global change in RNA Polymerase II pausing during the Drosophila midblastula transition |
GSE41729 |
Transcriptional silencing of transposable elements by Piwi and its impact on chromatin and gene expression |
GSE43734 |
Expression data from 0.15M and 0.7M-fed wild-type and ChREBP mutant, third instar Drosophila larval fat bodies (FBs) |
GSE44612 |
Comparative Validation of the D. melanogaster Encyclopedia of DNA Elements Transcript Models |
GSE44686 |
Genome-wide analysis of dFOXO binding sites in Drosophila |
GSE45167 |
Ultra-deep profiling of alternatively spliced Drosophila Dscam isoforms by circularization-assisted multi-segment sequencing |
GSE45290 |
Transposon defense by endo-siRNAs, piRNAs and somatic pilRNAs: Roles of Loqs-PD and R2D2 |
GSE45894 |
The genetic framework of the Drosophila piRNA pathway |
GSE46614 |
Ibf1 and Ibf2 are DNA-binding proteins required for insulator function in Drosophila [ChIP-seq] |
GSE47559 |
Ibf1 and Ibf2 are DNA-binding proteins required for insulator function in Drosophila |
GSE49078 |
Stable pausing by RNA polymerase II provides an opportunity to target and integrate regulatory signals |
GSE49102 |
dDsk2 stabilizes dHP1c binding at TSS [ChIP-Seq] |
GSE49104 |
dDsk2 stabilizes dHP1c binding at TSS |
GSE49480 |
Identifying targets of DSX with ChIP-seq, DamID-seq and DamID-chip and transcriptional response to DSX isoform switch |
GSE49809 |
Dissection of thousands of cell type-specific enhancers identifies dinucleotide repeat motifs as general enhancer features |
GSE50515 |
Male-specific Fruitless isoforms have different regulatory roles conferred by distinct zinc finger DNA binding domains |
GSE51412 |
Transcriptome and proteome quantification of a tumor model provides novel insights into post-transcriptional gene regulation |
GSE51598 |
CTCF/CP190 and ISWI dependent regulation of nucleosome occupancy [ChIP-seq] |
GSE51599 |
CTCF/CP190 and ISWI dependent regulation of nucleosome occupancy [MNase-seq] |
GSE51600 |
CTCF/CP190 and ISWI dependent regulation of nucleosome occupancy |
GSE52472 |
Non-canonical TSSs of TEs alter gene structure and expression in Drosophila melanogaster |
GSE52943 |
Genome-wide binding of the homeodomain transcription factor Sine oculis (So) in the Drosophila eye imaginal disc |
GSE53020 |
Domain ChIRP reveals the modularity of long noncoding RNA architecture, function, and target genes |
GSE54067 |
RNA-seq: technical variability and sampling (female) |
GSE54069 |
RNA-seq: technical variability and sampling |
GSE54600 |
Global transcriptional Analysis of Yap/Yki Orthologs in Drosophila melanogaster by RNA Seq |
GSE54603 |
Functional Evolution of the Yap/Yorkie Proto-oncogene and Elucidation of its Core Transcriptional Program |
GSE56665 |
mRNA profile of dG9a-depleted early embryo in Drosophila melanogaster |
GSE57029 |
Profiling and comparison of miRNA populations in male and female tissues from Drosophila melanogaster at various stages |
GSE57876 |
Enhancer-core promoter specificity separates developmental and housekeeping regulation |
GSE58937 |
The Drosophila Tis11 protein and its effects on mRNA expression in flies |
GSE60428 |
Cooperativity, specificity and evolutionary stability of Polycomb targeting in Drosophila |
GSE60504 |
Drosophila melanogaster midgut transcriptome analysis after an oral infection by the entomopathogen bacteria Serratia marcescens |
GSE61361 |
Transcriptome profiling of Drosophila intestinal cells |
GSE65441 |
Zelda overcomes the high intrinsic nucleosome barrier at enhancers during Drosophila zygotic genome activation |
GSE66284 |
CAGE-Seq of gonads and carcasses from D. melanogaster and D. pseudoobscura |
GSE67400 |
The Wright Stuff: Reimagining Path Analysis Reveals Novel Components of the Sex Determination Hierarchy in Drosophila Melanogaster |
GSE67805 |
Genome-wide mapping of Collier in vivo binding sites highlights its hierarchical position in different transcription regulatory networks |
GSE68983 |
Genome-wide analysis of enhancers in Drosophila DV patterning |
GSE76214 |
Effect of high-sugar feeding on wandering third instar larval fat body gene expression in Drosophila melanogaster |
GSE76912 |
Genome wide distribution of gammaH2AvD in Wild Type and RNAi dH1 Drosophila melanogaster S2 cells |
GSE83871 |
Characterization of active piRNAs and an piRNA machinery in WRR-1 cells deficient for the Hippo pathway (deficient for the warts tumor suppressor) and expressing activated RasV12 (small RNA) |
GSE83877 |
Characterization of active piRNAs and piRNA machinery in WRR-1 cells deficient for the Hippo pathway (deficient for the warts tumor suppressor) and expressing activated RasV12 |
GSE85191 |
Widespread transcriptional pausing and elongation control at enhancers |
GSE85768 |
Transcripts enriched in microsome fraction in ribosome-independent manner |
GSE86243 |
Genome wide analyses of Su(Hw)M393 binding in the Drosophila ovary |
GSE89459 |
Genome wide binding of trr (ChIP-seq) and expression analysis (RNA-seq) of trr- and G9a mutant fly heads |
GSE90724 |
Germline Dependent Gene Expression Changes in the Adult Head of Drosophila melanogaster Females |
GSE93100 |
Mrg15 allosterically activates Ash1’s H3K36 methyltransferase activity and facilitates Ash1’s trithorax group protein function in Drosophila |
GSE94394 |
Identification of endogenous changes in the transcriptome of young versus old Drosophila intestinal stem cells using Next Generation RNA Sequencing |
GSE95800 |
Effect of Seven-up RNAi on wandering third instar larval fat body gene expression in Drosophila melanogaster |
GSE96763 |
Effect of increased insulin signaling on third instar larval fat body gene expression in Drosophila melanogaster |
GSE96959 |
Genomic distribution of dBigH1 in whole testes [ChIP-Seq] |
GSE97447 |
Effect of reducing insulin signaling on third instar larval fat body gene expression in Drosophila melanogaster |
GSE98223 |
Genomic distribution of H3T3ph in Drosophila melanogaster S2 cells |
GSE103234 |
Microprocessor recruitment to elongating RNA Polymerase II is required for differential expression of microRNAs |
GSE103291 |
Genomic distribution of dBigH1 in early embryos [ChIP-Seq] |
GSE103292 |
Genomic distribution of dBigH1 in whole testes and early embryos |
GSE104592 |
The tumor suppressor Brat controls neuronal lineages by inhibiting the transcription factors Deadpan and Zelda |
GSE104839 |
Capicua controls Toll/IL-1 signaling targets independently of RTK regulation |
GSE110432 |
Effect of EcR RNAi on wandering third instar larval fat body gene expression in Drosophila melanogaster |
GSE111728 |
Effect of transgenic RNAi on wandering third instar larval fat body gene expression in Drosophila melanogaster |
GSE117217 |
Remapping the SRA: Drosophila melanogaster RNA-Seq data from the Sequence Read Archive |
GSE121059 |
Effects of high fructose and high glucose on third instar larval fat body gene expression in Drosophila melanogaster |
GSE155874 |
Modulation of Aub–Tdrd interactions elucidates piRNA amplification and germ plasm formation |
GSE172753 |
DNase-seq from S2 (ENCSR834VXA) |
GSE178332 |
RNAseq from cuticles of tumor free (w1118) and tumor bearing Drosophila larvae (MARCM RasV12, scrib1) tumour-bearing Drosophila larvae |
GSE256642 |
Control ChIP-seq from whole organism (ENCSR195DZI) |
GSE257632 |
Control ChIP-seq from whole organism (ENCSR851BDY) |
GSE257952 |
TF ChIP-seq from whole organism (ENCSR593IEE) |
GSE259102 |
TF ChIP-seq from whole organism (ENCSR511YXX) |
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Supplementary data files not provided |
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