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Status |
Public on Aug 11, 2014 |
Title |
CTCF/CP190 and ISWI dependent regulation of nucleosome occupancy [MNase-seq] |
Organism |
Drosophila melanogaster |
Experiment type |
Genome binding/occupancy profiling by high throughput sequencing
|
Summary |
MNase-seq was performed in order to analyze changes in nucleosomal occupancy after depletion of CTCF/P190 and ISWI from Drosophila S2 cells
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Overall design |
MNase-seq from Drosophila S2 nuclei after CTCF/CP190 or ISWI-specific RNAi treatment
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Contributor(s) |
Renkawitz R, Bartkuhn M |
Citation(s) |
25247414 |
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Submission date |
Oct 23, 2013 |
Last update date |
May 15, 2019 |
Contact name |
Marek Bartkuhn |
E-mail(s) |
marek.bartkuhn@gen.bio.uni-giessen.de
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Organization name |
Justus-Liebig-University Giessen
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Department |
Biomedical Informatics and Systems Medicine
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Street address |
Aulweg 132
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City |
Giessen |
State/province |
Hessen |
ZIP/Postal code |
35392 |
Country |
Germany |
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Platforms (1) |
GPL11203 |
Illumina Genome Analyzer IIx (Drosophila melanogaster) |
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Samples (3) |
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This SubSeries is part of SuperSeries: |
GSE51600 |
CTCF/CP190 and ISWI dependent regulation of nucleosome occupancy |
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Relations |
BioProject |
PRJNA223672 |
SRA |
SRP031855 |