|
| Status |
Public on Aug 11, 2014 |
| Title |
CTCF/CP190 and ISWI dependent regulation of nucleosome occupancy [MNase-seq] |
| Organism |
Drosophila melanogaster |
| Experiment type |
Genome binding/occupancy profiling by high throughput sequencing
|
| Summary |
MNase-seq was performed in order to analyze changes in nucleosomal occupancy after depletion of CTCF/P190 and ISWI from Drosophila S2 cells
|
| |
|
| Overall design |
MNase-seq from Drosophila S2 nuclei after CTCF/CP190 or ISWI-specific RNAi treatment
|
| |
|
| Contributor(s) |
Renkawitz R, Bartkuhn M |
| Citation(s) |
25247414 |
| |
| Submission date |
Oct 23, 2013 |
| Last update date |
May 15, 2019 |
| Contact name |
Marek Bartkuhn |
| E-mail(s) |
marek.bartkuhn@gen.bio.uni-giessen.de
|
| Organization name |
Justus-Liebig-University Giessen
|
| Department |
Biomedical Informatics and Systems Medicine
|
| Street address |
Aulweg 132
|
| City |
Giessen |
| State/province |
Hessen |
| ZIP/Postal code |
35392 |
| Country |
Germany |
| |
|
| Platforms (1) |
| GPL11203 |
Illumina Genome Analyzer IIx (Drosophila melanogaster) |
|
| Samples (3) |
|
| This SubSeries is part of SuperSeries: |
| GSE51600 |
CTCF/CP190 and ISWI dependent regulation of nucleosome occupancy |
|
| Relations |
| BioProject |
PRJNA223672 |
| SRA |
SRP031855 |
