GSE91019 |
Gene expression response to 5 microbial stimuli in Detroit562 cells [RNA-seq] |
GSE91020 |
Variation of genome-wide NF-kappa B RELA binding sites in response to different microbial stimuli |
GSE99194 |
Genome Organization Drives Chromosome Fragility [END-seq] |
GSE99197 |
Genome Organization Drives Chromosome Fragility |
GSE99299 |
Cytokine Stimulation of PTPN2-deleted cancer cells |
GSE107304 |
Increasing miRNA sequencing accuracy using an RNA circularization approach |
GSE107566 |
RNA-seq for U937 cells with or without 3 day differentiation with PMA and recovery |
GSE108516 |
Targeting of the YAP/SMAD molecular circuit inhibits a TGFb1-induced myofibroblast phenotype |
GSE108621 |
Transcriptional profiling of HT-29 cells with different treatments |
GSE109177 |
CRISPR-Cas9 screens in human cells and primary neurons identify modifiers of C9orf72 dipeptide repeat protein toxicity |
GSE110684 |
Identification and characterization of HIV-specific resident memory CD8+ T cells in human lymphoid tissue |
GSE111266 |
Dnmt1 binds and represses genomic retroelements via DNA methylation in mouse early embryos |
GSE112076 |
Multi-omic analyses reveal minimal impact of the CRISPR-Cas9 nuclease on the host |
GSE112946 |
Transcriptional and chromatin profiles of duodenum epithelium upon HNF4 loss in mice by RNA-seq and ChIP-seq |
GSE113849 |
Degenerate 3'UTR DNA and RNA sequence data |
GSE114002 |
Human 5′ UTR design and variant effect prediction from a massively parallel translation assay |
GSE114632 |
Analysis of copy number alterations from a lncRNA perspective reveals ALAL-1 a mediator of NSCLC immune evasion. |
GSE114900 |
Nucleosomes stabilize ssRNA-dsDNA triple helices in human cells |
GSE115139 |
Myc/Max dependent long antisense noncoding RNA, EVA1A-AS, participates in survival of hepatocellular carcinoma (HCC) by suppressing anti proliferating gene Eva1A. |
GSE115301 |
Notch signalling mediates secondary senescence |
GSE115314 |
The lineage-specific transcriptional regulator, CDX2, navigates a dynamic chromatin landscape to control distinct stages of intestinal development |
GSE115862 |
Antisense lncRNA transcription mediates DNA demethylation to drive stochastic Protocadherin α promoter choice |
GSE116315 |
END-seq profile in B,T, and HCT116 untreated and upon HU treatment |
GSE116321 |
Dual Roles of Poly(dA:dT) Tracts in Replication Initiation and Fork Collapse |
GSE116323 |
Bulk RNA-seq analysis of HUVEC cell cultures with Cerebral Cavernous Malformation (CCM) protein knockdown |
GSE118797 |
Assessment of a highly multiplexed RNA sequencing platform and comparison to existing high-throughput gene expression profiling techniques [SFL] |
GSE118882 |
Dysregulation of PDGFRB contributes to the pathogenesis of LMNA-related dilated cardiomyopathy [RNA-seq] |
GSE118883 |
Dysregulation of PDGFRB contributes to the pathogenesis of LMNA-related dilated cardiomyopathy [ATAC-seq] |
GSE118884 |
Dysregulation of PDGFRB contributes to the pathogenesis of LMNA-related dilated cardiomyopathy [ChIP-seq] |
GSE118885 |
Dysregulation of PDGFRB contributes to the pathogenesis of LMNA-related dilated cardiomyopathy |
GSE119234 |
Analysis of gene expression differences in lymph node B cell populations of HIV-infected and uninfected controls |
GSE120442 |
Multiplexed enrichment and genomic profiling of peripheral blood cells reveal subset-specific immune signatures |
GSE120551 |
Gain of function DNMT3A mutations cause microcephalic dwarfism and hypermethylation of Polycomb-regulated regions (human fibroblast ChIP-seq) |
GSE120554 |
Gain of function DNMT3A mutations cause microcephalic dwarfism and hypermethylation of Polycomb-regulated regions (human RRBS) |
GSE120558 |
Gain of function DNMT3A mutations cause microcephalic dwarfism and hypermethylation of Polycomb-regulated regions |
GSE120695 |
A multiplexed assay for exon recognition reveals that an unappreciated fraction of rare genetic variants cause large-effect disruptions to splicing |
GSE120798 |
Development and Characterisation of Acquired Radioresistant Breast Cancer Cell Lines. |
GSE121309 |
Single cell analysis reveals dynamics of transposable element expression following epigenetic de-repression |
GSE121315 |
Effect of Neutrophil Extracellular Traps and Psoriasis-Associated TRAF3IP2 Genotype on Induction of Human Th17 Cells |
GSE121376 |
Genome-wide transcriptional analysis of human iPSC-derived healthy control vs. schizophrenia cortical interneurons |
GSE122462 |
Anti-cancer drugs curaxins target the 3D genome organization [ChIP-seq] |
GSE122463 |
Anti-cancer drugs curaxins target the 3D genome organization |
GSE123105 |
Selective roles of vertebrate PCF11 in premature and full-length transcript termination |
GSE123577 |
High-throughput combinatorial indexing enables scalable single-cell chromatin accessibility profiling [PBMC] |
GSE123578 |
High-throughput combinatorial indexing enables scalable single-cell chromatin accessibility profiling [Blood] |
GSE123580 |
High-throughput combinatorial indexing enables scalable single-cell chromatin accessibility profiling [Bone marrow] |
GSE123581 |
Droplet-based combinatorial indexing for massive-scale single-cell chromatin accessibility |
GSE125215 |
Digital gene expression (DGE) based transcript profiling of CDK inhibitors |
GSE125372 |
Widespread transcriptional scanning in the testis modulates gene evolution rates |
GSE125805 |
Pilot transcriptome analysis of human iPSC-derived healthy control vs. schizophrenia cortical interneurons |
GSE125872 |
iPS derived microglia like cells cultured with human neurons and astrocytes |
GSE125999 |
Genome-wide transcriptional analysis of human iPSC-derived healthy control vs. schizophrenia cortical interneurons. |
GSE126085 |
Single-cell RNA-sequencing of CD14+ monocyte differentiation with M-CSF stimulus |
GSE126188 |
Mismatch-repair signature mutations activate gene enhancers across human colorectal cancer epigenomes |
GSE126221 |
Transcriptional cofactors display core promoter class-specificity in human |
GSE126636 |
The structural basis for cohesin/CTCF anchored loops [Hi-C] |
GSE126637 |
The structural basis for cohesin/CTCF anchored loops |
GSE126890 |
Tissue Specific Methylation and Expression Patterns of ADCA-DN Patients |
GSE127256 |
Selective roles of vertebrate PCF11 in premature and full-length transcript termination (ChIP-seq) |
GSE128005 |
Exogenous expression analysis of U1 snRNA mutation |
GSE128223 |
Single cell RNAseq of human TCRVdelta 1 and TCRVdelta 2 gammadelta T lymphocytes purified from healthy adults blood |
GSE128682 |
Transcriptional signatures that define Ulcerative Colitis in remission |
GSE128833 |
The hematopoietic master transcription factor PU.1 requires its interaction with the SWI/SNF remodeler to access chromatin de novo [ATAC-seq] |
GSE128835 |
The hematopoietic master transcription factor PU.1 requires its interaction with the SWI/SNF remodeler to access chromatin de novo [CTV1_TALL_HELP ChIP-seq] |
GSE128837 |
The hematopoietic master transcription factor PU.1 requires its interaction with the SWI/SNF remodeler to access chromatin de novo |
GSE128844 |
Increased Muscleblind levels by chloroquine treatment improves myotonic dystrophy type 1 phenotypes in in vitro and in vivo models |
GSE129524 |
Topoisomerase II-induced Chromosome Breakage and Translocation Is Determined by Chromosome Architecture and Transcriptional Activity [END-seq] |
GSE129529 |
Topoisomerase II-induced Chromosome Breakage and Translocation Is Determined by Chromosome Architecture and Transcriptional Activity |
GSE130226 |
Inactivation of CFTR by CRISPR/Cas9 alters transcriptional regulation of inflammatory pathways and other networks |
GSE130469 |
Unlocking the transcriptomic potential of formalin-fixed paraffin embedded clinical tissues: Comparison of gene expression profiling approaches [Lexogen_QuantSeq] |
GSE130537 |
High-throughput combinatorial indexing enables scalable single-cell chromatin accessibility profiling [GM12878] |
GSE130592 |
Combinatorial small molecule treatment enhances the in vitro maturation of pluripotent stem cell-derived myotubes |
GSE130643 |
Unlocking the transcriptomic potential of formalin-fixed paraffin embedded clinical tissues: Comparison of gene expression profiling approaches [BioSpyder_TempoSeq] |
GSE130644 |
Unlocking the transcriptomic potential of formalin-fixed paraffin embedded clinical tissues: Comparison of gene expression profiling approaches [QiaSeq] |
GSE130645 |
Unlocking the transcriptomic potential of formalin-fixed paraffin embedded clinical tissues: Comparison of gene expression profiling approaches |
GSE130881 |
Single-cell RNA-sequencing of GM-CSF derived macrophages |
GSE130956 |
Investigation of ST8SIA1 expression in icaritin-treated and untreated melanoma cell lines |
GSE131267 |
A large peptidome dataset improves HLA class I epitope prediction across most of the human population |
GSE131318 |
Metabolic changes during human adipocyte differentiation promote stable DNA hydroxymethylation and binding of acetylated NEIL1 to adipogenic enhancers |
GSE131695 |
microRNA expression in human traumatic brain injury biofluids |
GSE132048 |
Linking Indirect Effects of Cytomegalovirus to Modulation of Monocyte Innate Immune Function |
GSE132172 |
Single-cell RNA sequencing reveals the impact of chromosomal instability on glioblastoma cancer stem cells |
GSE132228 |
Social network architecture of human immune cells in ZIKV-infected patients highlights a unique role of plasmacytoid dendritic cells |
GSE132403 |
Chromatin accessibility dynamics in a model of human forebrain development |
GSE133071 |
High-throughput combinatorial indexing enables scalable single-cell chromatin accessibility profiling [Validation] |
GSE133116 |
Transcriptome analysis of human glioblastoma tumor cells driven by PIK3CA mutation variants |
GSE133655 |
In Vitro Transcription Recycling Assay Identifies PAF1 as a Driver of RNA Pol II Recycling |
GSE134141 |
The analysis of copy number alterations from a lncRNA perspective reveals a regulator of lung cancer immune evasion |
GSE134377 |
Dynamic imaging of nascent RNA reveals general principles of transcription dynamics and pervasive recursive splicing |
GSE134426 |
Next Generation Sequencing Facilitated Cerebellum DNA Methylation Analysis of Essential Tremor Patients |
GSE134576 |
Clonally expanded CD8 T cells patrol Alzheimer's cerebrospinal fluid [TEMRA] |
GSE134578 |
Clonally expanded CD8 T cells patrol Alzheimer's cerebrospinal fluid |
GSE134874 |
RNA-seq analysis of immune responses from human blood monocyte dendritic cells from 3 donors stimulated with 5 pattern recognition receptor (PRR) ligands along with their pairwise and triplet combinations |
GSE135051 |
Clonally expanded CD8 T cells patrol Alzheimer's cerebrospinal fluid [TCR-seq] |
GSE135122 |
Modulation of Syndecan-1/4 reduces the invasive potential of endometrioma through TGF-β signalling |
GSE135384 |
Partial loss of CFIm25 causes aberrant alternative polyadenylation and learning deficits |
GSE135490 |
HA-TFE3 bound regions in HK-2 HA-TFE3-inducible cells |
GSE135507 |
Pitfalls in Single Clone CRISPR-Cas9 Mutagenesis to Fine-map Regulatory Intervals |
GSE135677 |
IRF2 is a master regulator of human keratinocyte stem cell fate [ChIPmentation] |
GSE135680 |
IRF2 is a master regulator of human keratinocyte stem cell fate |
GSE135798 |
VEGF-A drives TOX-dependent T cell exhaustion in anti–PD-1–resistant microsatellite stable colorectal cancers |
GSE135870 |
Suppression of p53 response by blocking p53–Mediator binding with a stapled peptide |
GSE135882 |
GPSeq Reveals the radial organization of chromatin in the cell nucleus |
GSE136394 |
Single-cell transcriptome analysis reveals gene signatures associated with T-cell persistence following adoptive cell therapy |
GSE136550 |
Changes in adenoviral chromatin organization precede early gene activation |
GSE136586 |
Kallikrein-mediated cytokeratin 10 degradation is required for VZV propagation in skin |
GSE137275 |
FB5P-seq: FACS-based 5-prime end single-cell RNAseq for integrative analysis of transcriptome and antigen receptor repertoire in B and T cells |
GSE137344 |
Ileum Transcriptomic Profiling in Inflammatory Bowel Disease |
GSE137411 |
Bimodal Adenine and Cytosine CRISPR Base Editing on DNA |
GSE137596 |
Transcriptome-wide Profile of Cerebral Cavernous Malformations Patients Reveal Important Long noncoding RNA molecular signatures |
GSE137620 |
Origin of kidney papillary tumors from renal progenitors |
GSE137731 |
Epigenomic Atlas of Embryonic Human Heart Development |
GSE137752 |
The nascent m6A methylome in human cells |
GSE137941 |
Sliced Human Cortical Organoids for Modeling Distinct Cortical Neuronal Layer Formation |
GSE138025 |
Vascular fate in misidentified pluripotent-derived blood-brain-barrier endothelial cells rescued by transcriptional reprogramming. |
GSE138283 |
Assessment of Viral RNA in Idiopathic Pulmonary Fibrosis Using RNA-seq [nonPoly(A) RNA] |
GSE138292 |
Codon and amino acid content regulate mRNA stability in mammalian cells |
GSE138309 |
RNA sequencing of blood-brain barrier cells exposed to interleukin-6 |
GSE138516 |
Ets1 confers context-dependent activation of Notch signaling in T-cell leukemia [ChIP-Seq] |
GSE138614 |
Next-generation sequencing study in multiple sclerosis white matter brain lesions |
GSE138660 |
Ets1 confers context-dependent activation of Notch signaling in T-cell leukemia |
GSE138860 |
CRISPR-mediated mutagenesis of RNA editing cis-regulatory elements |
GSE138892 |
TooManyCells identifies and visualizes relationships of single-cell clades |
GSE138938 |
β-catenin regulates FOXP2 transcriptional activity via multiple binding sites |
GSE139003 |
RNA-seq timecourse of p53 activation with Nutlin-3a in IMR90 cells |
GSE139238 |
High-Throughput Translational Profiling with riboPLATE-seq |
GSE139369 |
Single-cell, multi-omic analysis identifies regulatory programs in mixed phenotype acute leukemia |
GSE139391 |
Selective 40S footprinting reveals that scanning ribosomes remain cap-tethered in human cells |
GSE139463 |
Selective Mediator-dependence of cell type-specifying transcription [TT-seq] |
GSE139468 |
Selective Mediator dependence of cell-type-specifying transcription |
GSE139685 |
Functional interactions between Mi-2β and AP1 complexes control response and recovery from barrier disruption |
GSE139944 |
Massively multiplex chemical transcriptomics at single cell resolution |
GSE140084 |
Master stress response gene ATF4 & other oncogenes are translated by DENR-dependent reinitiation |
GSE140198 |
RNA-seq analysis of colorectal cancer cell lines HT29-POLR1D-silenced and SW480-POLR1D-silenced |
GSE140203 |
Integrative single-cell chromatin and transcriptome profiling uncovers cell-type specific regulatory interactions |
GSE140221 |
Gene expression of human chord blood hematopoietic progenitor cells and induced hemato-endothelial progenitor cells derived from human iPSC |
GSE140235 |
Identification of pharmacologic inhibitors and activators of IL-4-induced macrophage polarization |
GSE140406 |
WWOX gene and estrogen receptor interplay in breast cancer |
GSE140488 |
BCL9 provides multi-cellular communication properties in colorectal cancer by interacting with paraspeckle proteins |
GSE140980 |
Transcriptomic analysis of ETV6/RUNX1 KO lymphoid cell line generated by CRISPR/Cas9 showed a distinct expression signature and a deregulation of its downstream signaling genes |
GSE141436 |
Quantitative tRNA-sequencing uncovers metazoan tissue-specific tRNA regulation |
GSE141498 |
Immunological fingerprints of controllers developing neutralizing HIV-1 antibodies |
GSE141669 |
Genomic landscapes of VEGF family members in endothelial cells |
GSE141944 |
Exome-seq of Glioblastoma Tumors and GBOs |
GSE141945 |
RNA-seq of Glioblastoma Tumors and GBOs |
GSE141946 |
Single Cell RNA-seq of Glioblastoma Tumors and GBOs |
GSE141947 |
Glioblastoma Tumors and GBOs |
GSE141990 |
Identifying and overcoming a mechanism of resistance to Wee1 kinase inhibitor AZD1775 in high grade serous ovarian cancer cells (OVCAR8) |
GSE142124 |
Identifying and overcoming a mechanism of resistance to Wee1 kinase inhibitor AZD1775 in high grade serous ovarian cancer cells (ES-2) |
GSE142126 |
Identifying and overcoming a mechanism of resistance to Wee1 kinase inhibitor AZD1775 in high grade serous ovarian cancer cells |
GSE142333 |
Transcriptomic dysregulation of SDCCGA8 KO retinal epithelial and immature neuronal cells. |
GSE142504 |
Genome-wide synthetic lethal CRISPR screen identifies FIS1 as a genetic interactor of ALS-linked C9ORF72 |
GSE142682 |
Partial loss of CFIm25 causes aberrant alternative polyadenylation and learning deficits [human] |
GSE142683 |
Partial loss of CFIm25 causes aberrant alternative polyadenylation and learning deficits [superseries] |
GSE142740 |
High-throughput single-cell mitochondrial DNA genotyping reveals properties of clonal variation in human contexts [HumanMix] |
GSE142741 |
High-throughput single-cell mitochondrial DNA genotyping reveals properties of clonal variation in human contexts [MERRF-C1] |
GSE142742 |
High-throughput single-cell mitochondrial DNA genotyping reveals properties of clonal variation in human contexts [CD34-invitro] |
GSE142743 |
High-throughput single-cell mitochondrial DNA genotyping reveals properties of clonal variation in human contexts [CLL-scATAC] |
GSE142745 |
High-throughput single-cell mitochondrial DNA genotyping reveals properties of clonal variation in human contexts |
GSE143155 |
Poor Mitochondrial Reponses to Oxidative Stress in a Subset of Autism Spectral Disorder Patients |
GSE143441 |
N6-adenosine Methylation of Enhancer RNAs and YTHDC1 Facilitate Transcriptional Condensate Formation and 3D Chromatin Organization |
GSE143645 |
Joint Profiling of Chromatin Accessibility and CAR-T Integration Site Analysis at Population and Single-cell Levels I |
GSE143646 |
Joint Profiling of Chromatin Accessibility and CAR-T Integration Site Analysis at Population and Single-cell Levels II |
GSE143647 |
Joint Profiling of Chromatin Accessibility and CAR-T Integration Site Analysis at Population and Single-cell Levels |
GSE144076 |
Phase separation drives aberrant chromatin looping and cancer development [ChIP-Seq] |
GSE144329 |
A unique viral reservoir landscape associated with durable natural control of HIV-1 infection [ATAC-seq] |
GSE144332 |
A unique viral reservoir landscape associated with durable natural control of HIV-1 infection [RNA-seq] |
GSE144334 |
A unique viral reservoir landscape associated with durable natural control of HIV-1 infection |
GSE144500 |
VENTX gene expression marks a subset of human primordial germ cells |
GSE144510 |
SPARCLE, a p53-induced lncRNA, controls apoptosis after genotoxic stress by promoting PARP-1 cleavage |
GSE144643 |
A phase separation mechanism underlies development of cancer and aberrant organization of three-dimensional chromatin structure |
GSE144737 |
Modelling of pancreatic cancer biology: transcriptomic signature for 3D PDX-derived organoids and primary cell line organoid development |
GSE144819 |
Structural and Functional Characterization of G Protein-Coupled Receptors with Deep Mutational Scanning |
GSE145038 |
Intracellular accumulation of IFN-λ4 contributes to protection from liver cirrhosis by inducing ER stress and enhancing IRF1 signaling |
GSE145048 |
GDF5+ chondroprogenitors derived from human pluripotent stem cells, which resemble embryonic teno/ligamento-genic cells, preferentially form permanent chondrocytes |
GSE145651 |
Transcriptome analysis of HT1080 cells expressing HA-hZFAT-EGFP and EGFP |
GSE145814 |
Differential expression of gut miRNAs in idiopathic Parkinson's disease |
GSE145849 |
Phased gene expression and chromatin accessibility during progressive EMT and MET linked to dynamic CTCF engagement (ATAC-Seq) |
GSE145851 |
Phased gene expression and chromatin accessibility during progressive EMT and MET linked to dynamic CTCF engagement |
GSE146150 |
Dual function of hPSC-derived pericyte-like cells in vascularization and fibrosis-related cardiac tissue remodeling in vitro |
GSE146203 |
Small RNAs report early heart injury after cardiac surgery |
GSE146207 |
Coordination of mRNA and tRNA methylations by TRMT10A |
GSE146210 |
The viral oncoproteins Tax and HBZ control the host mRNA splicing landscape |
GSE146347 |
Spaceflight analogue culture enhances the host-pathogen interaction between Salmonella and a 3-D biomimetic intestinal co-culture model |
GSE146409 |
A single cell atlas of the human liver tumor microenvironment |
GSE146621 |
Distinct cardiac transcriptomic clustering in titin and lamin a/c-associated dilated cardiomyopathy patients |
GSE146639 |
Bulk and single cell sequencing (bc-Smart-seq2 and 10XGenomics) of human microglia from post mortem AD CNS tissue |
GSE146985 |
Characterization of pancreatic progenitor differentiation with GiBi-generated DE cells |
GSE147122 |
Polysaccharide-based scaffolds for in situ hydrogelation: Use for next generation of bioartificial cardiac tissues |
GSE147306 |
IRF1 governs the differential Interferon-Stimulated Gene responses in human monocytes and macrophages by regulating chromatin accessibility (ATAC - Differentiation) |
GSE147307 |
IRF1 governs the differential Interferon-Stimulated Gene responses in human monocytes and macrophages by regulating chromatin accessibility (ATAC - Time course) |
GSE147308 |
IRF1 governs the differential Interferon-Stimulated Gene responses in human monocytes and macrophages by regulating chromatin accessibility (ATAC - IRF1 KO THP-1) |
GSE147312 |
IRF1 governs the differential Interferon-Stimulated Gene responses in human monocytes and macrophages by regulating chromatin accessibility (RNA-seq - THP-1) |
GSE147313 |
IRF1 governs the differential Interferon-Stimulated Gene responses in human monocytes and macrophages by regulating chromatin accessibility (RNA-seq - THP-1 IRF1 KO) |
GSE147314 |
Chromatin accessibility dictates specific transcriptional response by different cells of the innate immune system |
GSE147395 |
Two subsets of stem-like CD8+ memory T cell progenitors with distinct fate commitments in humans |
GSE147398 |
Two subsets of stem-like CD8+ memory T cell progenitors with distinct fate commitments in humans |
GSE147814 |
Genome-wide chromatin accessibility mapping upon pharmacological LSD1 inhibition in MCC [ATACseq] |
GSE147817 |
Pharmacological LSD1 inhibition in MCC |
GSE147853 |
To study the function of KLF5 in squamous cancers and gastrointestinal cancers [ChIP-seq] |
GSE147856 |
To study the function of KLF5 in squamous cancers and gastrointestinal cancers |
GSE147905 |
Expression profiling by high-throughput RNA-sequencing following PGC1β and ERRα knockdown in HCT116 cells |
GSE148162 |
Dual Relief of T-Lymphocyte Proliferation and Effector Function Underlies Response to PD-1 Blockade in Epithelial Malignancies |
GSE148163 |
Gene expression in CD21low and CD21pos B cells from CVID patients |
GSE148218 |
Single cell characterization of arrested B-lymphoid differentiation and leukemic cell states in ETV6-RUNX1-positive pediatric leukemia |
GSE148389 |
MiR-1253 exerts tumor-suppressive effects in medulloblastoma via inhibition of CDK6 and CD276 (B7-H3) (RNA-seq dataset) |
GSE148390 |
MiR-1253 exerts tumor-suppressive effects in medulloblastoma via inhibition of CDK6 and CD276 (B7-H3) |
GSE148433 |
Efficient RNA polymerase II pause release requires U2 snRNP function |
GSE148508 |
High-throughput single-cell mitochondrial DNA genotyping reveals properties of clonal variation in human contexts [CD34-PBMC-invivo-scATAC] |
GSE148509 |
High-throughput single-cell mitochondrial DNA genotyping reveals properties of clonal variation in human contexts [CRC_scATACseq] |
GSE148546 |
Transcriptomic Analysis of the Regulation of Cancer Stemness in Breast Ductal Carcinoma In Situ by Vitamin D Compounds [RNA-Seq] |
GSE148547 |
Transcriptomic Analysis of the Regulation of Cancer Stemness in Breast Ductal Carcinoma In Situ by Vitamin D Compounds [Bisulfite-seq] |
GSE148548 |
Transcriptomic Analysis of the Regulation of Cancer Stemness in Breast Ductal Carcinoma In Situ by Vitamin D Compounds |
GSE148806 |
Potent androgen receptor inhibition unleashes oncogenic action of the KLF5 stem cell transcription factor in castration-resistant prostate cancer [RNA-seq] |
GSE148808 |
Potent androgen receptor inhibition unleashes oncogenic action of the KLF5 stem cell transcription factor in castration-resistant prostate cancer |
GSE148870 |
Transcriptomic profile of CTDP1 knockdown in MDA-MB-231 cells |
GSE149298 |
Integrative molecular profiling of autoreactive CD4 T cells in autoimmune hepatitis |
GSE149356 |
Single cell RNA-seq reveals high heterogeneity among human γδ T cells. |
GSE149448 |
Single molecule nanoscopy reveals that nuclear myosin VI regulates the spatial organization of mammalian transcription initiation |
GSE149574 |
Prox-seq: Simultaneous quantification of proteins, protein complexes and mRNA in single-cells via proximity-sequencing |
GSE149621 |
Blocking Fra-1 sensitizes triple-negative breast cancer to olaparib |
GSE149706 |
Werner Helicase Prevents Cell Death in Cancers with Microsatellite Instability (END-Seq) |
GSE149707 |
Werner Helicase Prevents Cell Death in Cancers with Microsatellite Instability (ChIP-Seq) |
GSE149709 |
Werner Helicase Prevents Cell Death in Cancers with Microsatellite Instability |
GSE149733 |
Structural interaction between DISC1 and ATF4 underlying transcriptional and synaptic dysregulation in an iPSC model of mental disorders |
GSE149929 |
Genome-wide profiling of RNA Polymerase II, MITF and DDX21 occupancy in human A375 cells stably expressing either empty vector or HA-tagged PRL3. |
GSE149979 |
The ERβ cistrome in colon cancer |
GSE150152 |
Mesenchymal Stem Cell derived exosome induced changes in Breast Cancer Cells |
GSE150228 |
Deep sequencing of pre-translational mRNPs reveals hidden flux through evolutionarily conserved AS-NMD pathways |
GSE150246 |
GO-CRISPR: a highly controlled workflow to improve discovery of gene essentiality |
GSE150300 |
Changes of gene expression patterns of human cancer cell lines responding to Interferon-gamma |
GSE150301 |
Gene expression patterns of tumor-infiltrating CD8 T cells according to the CD137 expression in human metastatic ovarian cancer |
GSE150377 |
Transcriptomic analysis (RNA-seq) of BRCA1-proficient and BRCA1-deficient ovarian cancer cells treated with the triazene compound CT913 and its metabolite CT913-M1 |
GSE150421 |
mRNA profiling after knockdown of lncRNA Cyrano |
GSE150462 |
Dnmt1 binds and represses genomic retroelements via DNA methylation in mouse early embryos (ChIP-seq) |
GSE150564 |
The cohesin acetylation cycle controls chromatin loop length through a PDS5A brake mechanism (Hi-C) |
GSE150590 |
Chromatin accessibility analysis of induced trophoblast stem cells. |
GSE150616 |
Transcriptional analysis of induced trophoblast stem cells and their derived placenta subtypes. |
GSE150653 |
Genes expression in glioma stem-like cells |
GSE150745 |
EZH2 non-canonically binds cMyc and p300 through a cryptic transactivation domain to mediate gene activation and promote oncogenesis [ChIP-Seq] |
GSE150823 |
EZH2 non-canonically binds cMyc and p300 through a cryptic transactivation domain to mediate gene activation and promote oncogenesis [RNA-Seq] |
GSE150955 |
ALC1 and PARP activities coordinate chromatin accessibility and viability in homologous recombination deficient cells (ATAC-seq) |
GSE150956 |
Integrated Assessment of Circulating Cell-Free MicroRNA Signatures in Plasma of Patients with Melanoma Brain Metastasis |
GSE150961 |
Treatment Naïve and Follow-Up Pediatric Ulcerative Colitis Rectal Gene Expression |
GSE151000 |
Lineage transcription factors ASCL1, NKX2-1, and PROX1 are enriched at super enhancers and co-regulate subtype-specific genes in small cell lung cancer [RNA-seq] |
GSE151001 |
Lineage transcription factors ASCL1, NKX2-1, and PROX1 are enriched at super enhancers and co-regulate subtype-specific genes in small cell lung cancer [HiCHIP] |
GSE151002 |
Lineage transcription factors ASCL1, NKX2-1, and PROX1 are enriched at super enhancers and co-regulate subtype-specific genes in small cell lung cancer |
GSE151029 |
Comparative transcriptomic analysis of WT, FOXK1/2 KO, DKO cells and FOXK1 KO cells with reconstitution of several FOXK1 mutants |
GSE151326 |
Large-scale evaluation of renewable PRCP monoclonal antibodies by ChIP-exo, STORM, and … |
GSE151341 |
Sequencing identifies a distinct signature of circulating microRNAs in early radiographic knee osteoarthritis |
GSE151379 |
A human tissue screen identifies a regulator of ER secretion as a brain size determinant [RNA-Seq] |
GSE151381 |
A human tissue screen identifies a regulator of ER secretion as a brain size determinant [scRNA-Seq] |
GSE151384 |
A human tissue screen identifies a regulator of ER secretion as a brain size determinant |
GSE151389 |
A KMT2A-AFF1 gene regulatory network highlights the role of core transcription factors and reveals the regulatory logic of key downstream target genes [CRISPR sgRNA screen] |
GSE151390 |
A KMT2A-AFF1 gene regulatory network highlights the role of core transcription factors and reveals the regulatory logic of key downstream target genes. |
GSE151607 |
Combined inhibition of EZH2 and degradation of Ikaros has synergistic effects in germinal center B-cell diffuse large B-cell lymphoma [RNA-seq] |
GSE151796 |
Comparison of two human organoid models of lung and intestinal inflammation reveals Toll-like receptor signalling activation and monocyte recruitment. |
GSE151810 |
RNA sequencing analysis of lnc-HLX-2-7 interacting genes and pathways in medulloblastoma |
GSE151832 |
Super-enhancer based development of an endothelial specific lentiviral vector |
GSE151937 |
mRNA sequencing of human osteoarthritis chondrocytes treated with or without autotaxin inhibitor |
GSE151959 |
Nascent chain interactions of proximal ribosomes drive homo-oligomer assembly |
GSE152069 |
Combined inhibition of EZH2 and degradation of Ikaros has synergistic effects in germinal center B-cell diffuse large B-cell lymphoma |
GSE152137 |
Detection of early stage pancreatic cancer using 5-hydroxymethylcytosine signatures in circulating cell free DNA |
GSE152261 |
Differential Deep RNA Sequencing Revealed Various Bacterial Infections and Host Responses in Inflammatory Cardiomyopathy |
GSE152265 |
Sustained activation of AMPK enhances differentiation of human iPSC-derived cardiomyocytes via sirtuin activation |
GSE152341 |
Gene expression profiles in children under treatment for a malignancy presenting with neutropenic fever |
GSE152438 |
Genome-wide transcriptome analysis of human iPSC-derived cortical interneurons under inflammation conditions |
GSE152469 |
CITE-Seq profiling of CLL under ibrutinib treatment reveals transcriptional evolution of leukemic and immune cells. |
GSE152517 |
Loss of G protein pathway suppressor 2 in human adipocytes triggers lipid remodeling through upregulation of ATP binding cassette subfamily G member 1 |
GSE152571 |
RNA-Seq analysis of human CD56bright NK cells cultured with ascorbic acid |
GSE152638 |
Effect of microRNA-27b-3p mimic treatment on human osteoarthritis fibroblast-like synoviocyte gene expression profiles |
GSE152768 |
The LRRK2 G2019S mutation alters astrocyte-to-neuron communication via extracellular vesicles and induces neuron atrophy in a human iPSC-derived model of Parkinson’s disease |
GSE152807 |
Interactomics Analyses of Wild-type and Mutant A1CF Reveal Diverged Functions in Regulating Cellular Lipid Metabolism |
GSE152811 |
RNA-seq for DIMT1 wild-type and E85A mutant overexpression in DIMT1 heterozygous knockout HEK cells |
GSE153173 |
Transcriptomic characterization of locally relapsed brain metastases after neurosurgery |
GSE153243 |
Brd/BET Proteins Influence the Genome-Wide Localization of the Kaposi’s Sarcoma-associated Herpesvirus and Murine Gammaherpesvirus Major Latency Proteins [ChIP-seq] |
GSE153244 |
Brd/BET Proteins Influence the Genome-Wide Localization of the Kaposi’s Sarcoma-associated Herpesvirus and Murine Gammaherpesvirus Major Latency Proteins |
GSE153319 |
Single cell transcriptomc analysis of CD34+ cells from primary myelofibrosis patient |
GSE153639 |
A regulatory axis of YY1-PFKP promotes aggressive prostate tumorigenesis via potentiating tumor cell metabolism [ChIP-seq] |
GSE153640 |
A regulatory axis of YY1-PFKP promotes aggressive prostate tumorigenesis via potentiating tumor cell metabolism |
GSE153643 |
Single cells from adipose and liver |
GSE153893 |
Changes in nuclear shape and gene expression in response to simulated microgravity are LINC complex-dependent |
GSE153958 |
Interactions of Monocytes, HIV, and ART Identified by an Innovative scRNAseq Pipeline: Pathways to Reservoirs and HIV-Associated Comorbidities |
GSE154095 |
p53 transcription factor mediates nuclear speckle association of target genes |
GSE154279 |
Nuclear Role for Human Argonaute-1 as an Estrogen-dependent Transcription Coactivator |
GSE154342 |
Identification of pharmacologic inhibitors and activators of IL-4-induced macrophage polarization [PBMC ChIP-seq] |
GSE154343 |
Identification of pharmacologic inhibitors and activators of IL-4-induced macrophage polarization [THP-1 ChIP-seq] |
GSE154345 |
Identification of pharmacologic inhibitors and activators of IL-4-induced macrophage polarization [PBMC RNA-seq] |
GSE154346 |
Identification of pharmacologic inhibitors and activators of IL-4-induced macrophage polarization [THP-1 RNA-seq] |
GSE154347 |
Identification of pharmacologic inhibitors and activators of IL-4-induced macrophage polarization in PBMC and THP-1 cells |
GSE154430 |
The SARS-CoV-2 RNA-protein interactome in infected human cells |
GSE154460 |
CENP-A overexpression promotes aneuploidy and karyotypic heterogeneity |
GSE154644 |
CX3CL1 and IL-15 Promote CD8 T Cell Chemoattraction in HIV and in Atherosclerosis |
GSE154842 |
Tumor-reactive tissue resident memory T cells, regulatory T cells and prognosis in early luminal-like breast cancer |
GSE155067 |
Genome-wide transcriptome analysis of human iPSC-derived migratory cortical interneurons. |
GSE155375 |
LoopSeq Synthetic Long Read Sequencing Uncovers Isoform Modulation in the progression of Colon Cancer [RNA-seq] |
GSE155472 |
Mechano-regulated RNA binding protein hnRNPC contributes to RNA homeostasis in heart failure [RIP-Seq] |
GSE155473 |
Mechano-regulated RNA binding protein hnRNPC contributes to RNA homeostasis in heart failure [RNA-Seq] |
GSE155474 |
Mechano-regulated RNA binding protein hnRNPC contributes to RNA homeostasis in heart failure |
GSE155495 |
Multiscale Analysis of Extracellular Matrix Remodeling in the Failing Heart |
GSE155498 |
Human biliary epithelial cells from discarded donor livers rescue bile duct structure and function in a mouse model of biliary disease |
GSE155816 |
Single keratinocyte analysis uncovers Foxm1 as a Yap-dependent regulator of human epidermal stem cells (scRNA-Seq) |
GSE155817 |
Single keratinocyte analysis uncovers Foxm1 as a Yap-dependent regulator of human epidermal stem cells |
GSE155888 |
CloneSeq: A Highly Sensitive Single-cell Analysis Platform for Comprehensive Characterization of Cells from 3D Culture |
GSE155916 |
TooManyPeaks identifies drug-resistant-specific regulatory elements from single-cell leukemic epigenomes [ATAC-seq] |
GSE155921 |
LoopSeq Synthetic Long Read Sequencing Uncovers Isoform Modulation in the progression of Colon Cancer |
GSE155971 |
MCM complexes are barriers that restrict loops and TADs |
GSE156043 |
Single cell RNA sequencing analysis of lnc-HLX-2-7 knock out in medulloblastoma |
GSE156150 |
Paired Imaging and Sequencing of Protein-DNA Interactions in Single Human Cells Using microDamID |
GSE156390 |
Role of TFIP11 in U6 snRNA modification and splicing efficiency |
GSE156441 |
Mechanisms of failing erythropoiesis in Diamond-Blackfan anemia revealed by single cell profiling of human bone marrow progenitors |
GSE156474 |
High throughput joint profiling of chromatin accessibility and protein levels in single cells [PBMCs] |
GSE156476 |
High throughput joint profiling of chromatin accessibility and protein levels in single cells [Tcell KO] |
GSE156477 |
High throughput joint profiling of chromatin accessibility and protein levels in single cells [marrow] |
GSE156478 |
High throughput joint profiling of chromatin accessibility and protein levels in single cells |
GSE156737 |
Differential cofactor dependencies define functionally distinct types of human enhancers (PRO-seq) |
GSE156740 |
Differential cofactor dependencies define functionally distinct types of human enhancers (STARR-seq) |
GSE156741 |
Differential cofactor dependencies define functionally distinct types of human enhancers |
GSE156988 |
FD-seq: Droplet-based RNA sequencing of fixed single cells |
GSE157039 |
ChIP-seq analysis of HA-KAT6A in MOLM-13 AML cells |
GSE157042 |
Epigenetic profiling of cells following WM-1119 treatment |
GSE157052 |
ELAVL1 Primarily Couples mRNA Stability with the 3'UTRs of Interferon Stimulated Genes |
GSE157126 |
Antiprogestins reduce epigenetic field cancerization in breast tissue of young healthy women |
GSE157299 |
Positional influence on cellular transcriptional identity revealed through spatially segmented single-cell transcriptomics |
GSE157486 |
Single cell analysis of protein epitopes and chromatin accessibility using PHAGE-ATAC |
GSE157581 |
TTP protects against acute liver failure by regulating CCL2 and CCL5 through m6A RNA methylation |
GSE157852 |
Human Pluripotent Stem Cell-Derived Neural Cells and Brain Organoids Reveal SARS-CoV-2 Neurotropism Predominates in Choroid Plexus Epithelium |
GSE157981 |
NFAT signalling in human mesenchymal stromal cells affects extracellular matrix metabolism and anti-fungal immune responses |
GSE158001 |
HyPR-seq: Single-cell quantification of chosen RNAs via hybridization and sequencing of DNA probes (bulk RNA-seq dataset) |
GSE158003 |
HyPR-seq: Single-cell quantification of chosen RNAs via hybridization and sequencing of DNA probes (HyPR-seq dataset) |
GSE158004 |
HyPR-seq: Single-cell quantification of chosen RNAs via hybridization and sequencing of DNA probes |
GSE158033 |
RNA-seq analysis of CaSki/SiHa/HeLa cell lines |
GSE158218 |
RNA Sequencing of the Androgen-Regulated Transcriptome in Human and Mouse Granulosa Cells |
GSE158296 |
An NSD3-targeting PROTAC (Proteolysis Targeting Chimeric) suppresses the NSD3 and cMyc oncogenic nodes in cancer cells |
GSE158298 |
Identification of required host factors for SARS-CoV-2 infection in human cells |
GSE158404 |
De novo DNA methyltransferase activity in colorectal cancer is directed towards H3K36me3 marked CpG island (H3K36me3 ChIP-Rx_seq) |
GSE158405 |
De novo DNA methyltransferase activity in colorectal cancer is directed towards H3K36me3 marked CpG island (T7-DNMT3B ChIP-Rx_seq) |
GSE158406 |
De novo DNA methyltransferase activity in colorectal cancer is directed towards H3K36me3 marked CpG island |
GSE158589 |
iCLIP of HeLa cells with anti-TFIP11 antibody |
GSE158591 |
NUDT21 regulates intron detention of the SAM synthetase MAT2A RNA |
GSE158632 |
Integrated mRNA/miRNA-seq of Caco-2 and HT-29 cells under chemical hypoxia (cobalt chloride, oxyquinoline) |
GSE158654 |
Adipocyte-derived extracellular vesicles regulate survival and function of pancreatic β-cells |
GSE158825 |
Association of Presurgical Circulating MicroRNAs with 1-Year Postsurgical Pain Reduction in Lumbar Spinal Stenosis Patients with Spine Facet Osteoarthritis |
GSE159051 |
Intrahepatic CD69+ Vd1 T cells recirculate in the blood of patients affected by liver metastatic colorectal cancer and predict their overall survival |
GSE159072 |
Chromatin occupancy and chromatin status of K562 cells with a mutation causing exclusive expression of N-terminally truncated GATA1 (GATA1s). |
GSE159155 |
Repeated sampling facilitates within- and between-subject modeling of the human sperm transcriptome to identify dynamic and stress-responsive sncRNAs |
GSE159191 |
SARS-CoV-2 infected cells present HLA-I peptides from canonical and out-of-frame ORFs |
GSE159339 |
In vitro exposure of leukocytes to HIV pre-exposure prophylaxis (PrEP) decreases mitochondrial function and alters gene expression profiles. |
GSE159422 |
Histone H2A.X Phosphorylation Activates Caspase-Induced Chromatin Condensation in Late Stage Erythropoiesis |
GSE159519 |
Identification of required host factors for SARS-CoV-2 infection in human cells [ECCITE-seq] |
GSE159598 |
DamID-Seq analysis of cutaneous squamous cell carcinoma cells |
GSE159633 |
RTF1 and SPT6 stimulate transcription elongation by two distinct mechanisms |
GSE160033 |
A Multiplexed, Next-Generation Sequencing Platform for High-Throughput Detection of SARS-CoV-2 [pilot cohort] |
GSE160034 |
A Multiplexed, Next-Generation Sequencing Platform for High-Throughput Detection of SARS-CoV-2 [extended cohort] |
GSE160036 |
A Multiplexed, Next-Generation Sequencing Platform for High-Throughput Detection of SARS-CoV-2 |
GSE160351 |
Macrophage expression and prognostic significance of the long pentraxin PTX3 in COVID-19 |
GSE160614 |
MicroRNA profiling in oesophageal adenocarcinoma cell lines and patient serum samples reveals a role for miR-451a in radiation resistance [patients with Oesophageal Adenocarcinoma] |
GSE160637 |
The genome-wide impact of trisomy 21 on DNA methylation and its implications for hematopoiesis |
GSE160856 |
ERbeta influencing p65 cistromes in colon cancer cells |
GSE160870 |
Gene Expression of A375 Cells After Fluvastatin Treatment |
GSE160882 |
Next generation sequencing of the transcriptome of NPC cell line C666_1 under various drug treatments. |
GSE161077 |
CD49f defines a subset of dysfunctional regulatory T cells circulating in the human peripheral blood |
GSE161110 |
Metabolic changes during human adipocyte differentiation promote stable DNA hydroxymethylation and binding of acetylated NEIL1 to adipogenic enhancers [hMe-Seal] |
GSE161149 |
MicroRNA profiling in oesophageal adenocarcinoma cell lines and patient serum samples reveals a role for miR-451a in radiation resistance |
GSE161192 |
CD4+ T cells contribute to neurodgeneration in Lewy Body dementia |
GSE161235 |
Illumina RNA-seq of Human rhabdomyosarcoma Rh36 cell mouse xenograft tumors: effect of RITA, GANT61 and RITA/GANT61 combination treatments on xenograft tumor growth |
GSE161301 |
RNA-Seq and Ribo-Seq analysis of contol and METTL3 inducible shRNA LNCaP lines with and without doxycycline induction |
GSE161302 |
RNA-Seq analysis of contol and METTL3 inducible shRNA LNCaP lines with and without enzalutamide treatment |
GSE161304 |
Mapping of m6A and Its Regulatory Targets in Prostate Cancer Reveals a METTL3-low Induction of Therapy Resistance |
GSE161331 |
Cell-free DNA methylome profiling by MBD-seq with ultra-low input |
GSE161408 |
Direct Induction of hemogenic endothelial progenitors from hPSCs by defined factors revealed by single-cell transcriptome analysis |
GSE161894 |
Targeted single-cell RNA sequencing data of residual TIM-3+ leukemic stem cells post-SCT |
GSE161897 |
Differentially expressed genes in myotubes derived from MBNL knockouts hiPSCs generated by CRISPR/Cas9. |
GSE161952 |
Protein mimetic amyloid inhibitor potently abrogates cancer-associated mutant p53 aggregation and restores tumor suppressor function |
GSE162048 |
p53 is a central regulator driving neurodegeneration caused by C9orf72 poly(PR) |
GSE162097 |
The identity of human tissue-emigrant CD8+ T cells (scRNAseq, scTCRseq, bulk RNA-seq) |
GSE162178 |
Epigenetic landscape of CD8 T cell subsets |
GSE162179 |
Transcriptional landscape of CD8 T cell subsets |
GSE162180 |
The identity of human tissue-emigrant CD8+ T cells |
GSE162332 |
Transcriptome analysis of ER+/PR+, ER-/PR+ and triple negative breast tumors |
GSE162393 |
Elevated Extracellular cGMP Produced after Exposure to Enterotoxigenic Escherichia coli (ETEC) Heat-Stable Toxin (ST) Induces Epithelial IL-33 Release and Alters Intestinal Immunity |
GSE162429 |
STAT3 enhances sensitivity of glioblastoma to drug-induced autophagy-dependent lysosomal cell death |
GSE162571 |
Genetic deletion of ZNF91 in human embryonic stem cells leads to ectopic activation of SVAs and collective upregulation of KRAB zinc finger gene clusters |
GSE162649 |
Quaking regulates lineage-specific splicing patterns between early progenitor cells and is required for cardiac cell fate specification |
GSE162720 |
Optimized RNA-targeting CRISPR/Cas13d technology outperforms shRNA in identifying functional circRNAs |
GSE162845 |
Next generation sequencing of human cholangiocarcinoma cells and associated stem-like component |
GSE162911 |
A single-cell and spatial atlas of autopsy tissues reveals pathology and cellular targets of SARS-CoV-2 [gene expression levels] |
GSE163088 |
Rewired m6A epitranscriptomic networks link mutant p53 to neoplastic transformation |
GSE163214 |
Gene expression analysis in HeLa Kyoto cells upon knockdown of JAZF1 |
GSE163227 |
Potent, p53-independent induction of NOXA sensitizes MLL-rearranged B-cell acute lymphoblastic leukemia cells to venetoclax [RNA-Seq] |
GSE163229 |
Potent, p53-independent induction of NOXA sensitizes MLL-rearranged B-cell acute lymphoblastic leukemia cells to venetoclax |
GSE163275 |
IRF8 is an AML-specific Susceptibility Factor that Regulates Signaling Pathways and Proliferation of AML Cells |
GSE163318 |
Genome-wide ChIP-seq analysis of H2A.Z and H2A.Zac in HeLa Kyoto cells upon knockdown of JAZF1 |
GSE163323 |
Association of common genetic variation with Parkinson’s disease is driven by microglial modulation of Leucine-rich repeat kinase 2 expression |
GSE163530 |
A single-cell and spatial atlas of autopsy tissues reveals pathology and cellular targets of SARS-CoV-2 |
GSE163533 |
Healthy peripheral neutrophils total RNA-Seq: Serum Amyloid P component is an essential element of resistance against Aspergillus fumigatus |
GSE163688 |
SARSeq, a robust and highly multiplexed NGS assay for parallel detection of SRAS-CoV2 and other respiratory infections |
GSE163771 |
OCT4-SOX2 dimers reshape the epigenome to promote neural crest multipotency [ATAC-Seq] |
GSE163774 |
profiling of histone modifications in SARS-CoV-2 infected cells |
GSE163846 |
Cell free DNA 5-hydroxymethylcytosine as an emerging marker of acute myeloid leukemia |
GSE163855 |
Identification of functional regulatory variants implicates distinct transcriptional networks in dementia |
GSE163960 |
OCT4-SOX2 dimers reshape the epigenome to promote neural crest multipotency [CUT&RUN] |
GSE163961 |
OCT4-SOX2 dimers reshape the epigenome to promote neural crest multipotency |
GSE164101 |
Human hypothalamus |
GSE164102 |
Arcuate organoid cells |
GSE164413 |
RNAseq in JARID2 siRNA-treated in vitro differentiated human primary adipocytes |
GSE164492 |
Next generation sequencing analysis of control and KSR1 knockdown CRC cell line translatomes. |
GSE164719 |
Yin Yang 1 interacts with bromodomain-containing coactivators to promote tumorigenesis of advanced prostate cancer |
GSE164752 |
Functional characterization of splicing regulatory elements |
GSE164897 |
Single-Cell Trajectories of Melanoma Cell Resistance to Targeted Treatment |
GSE165076 |
ChIP-seq analysis of ENL following KAT6A CRISPR targeting |
GSE165115 |
FTO-mediated cytoplasmic m6Am demethylation adjusts stem-like properties in colorectal cancer cell |
GSE165132 |
HIV-exposed seronegative sex workers express high levels of regulatory T cells, low levels of T cell activation and an intact ectocervical tissue microenvironment |
GSE165254 |
Distinct transcriptional profile of blood mononuclear cells in Behcet’s disease: insights into the central role of neutrophil chemotaxis |
GSE165306 |
Transcriptional signature in microglia associated with Aβ plaque phagocytosis |
GSE165373 |
Transcriptional analysis of SARS-CoV-2 specific CD4 T cells |
GSE165412 |
Massively parallel characterization of CYP2C9 variant enzyme activity and abundance |
GSE165463 |
Human Core Nucleoporin Selectively Regulates Gene Transcription but is Dispensable for 3D Genome Organization |
GSE165585 |
Gene expression profile of Oral cancer cell line treated by olaparib or irradiation. |
GSE165716 |
BACH1, the master regulator of oxidative stress, modulates CFTR gene expression [4C-seq] |
GSE165719 |
BACH1, the master regulator of oxidative stress, modulates CFTR gene expression |
GSE166060 |
High-throughput mRNA-sequence of KSRP knock down cells in HL7702 CELLS |
GSE166120 |
Spatial transcriptomics of healing and non-healing diabetic foot ulcers |
GSE166181 |
scRNA-Seq of peripheral CD8 T cells from patients with metastatic melanoma taking ICI therapy. |
GSE166194 |
The Genome-Wide Binding Landscape of Estrogen Receptor β in Human Colon Can-cer Cells Reveals Its Tumor Suppressor Activity |
GSE166254 |
Super-enhancer landscape profiling in primary colorectal carcinoma |
GSE166259 |
Synthetic spike-in controls enable sensitive and reproducible cell-free methylome interrogation |
GSE166341 |
Hoxa13 overexpression drives chromosomal instability and liver tumorigenesis in mice |
GSE166442 |
Quantitative Analysis of Transcriptomes of small molecules generated Neural Precursor Cesll (smNPCs) and smNPCs-derived neurons by next generation sequencing |
GSE166470 |
Nuclear oligo hashing improves differential analysis of single-cell RNA-seq |
GSE166623 |
Condensates induced by transcription inhibition mislocalizes active chromatin to nucleoli |
GSE166823 |
Gene expression after knockdown of transcription factors in human iPSC-derived cardiac myocytes |
GSE167128 |
Perturbation panel profiling of human iPSC-derived cardiac myocytes and primary dermal fibroblasts |
GSE167252 |
Neuronal Enhancers are Hotspots for DNA Single-Strand Break Repair [ATAC-seq] |
GSE167253 |
Neuronal Enhancers are Hotspots for DNA Single-Strand Break Repair [ChIP-seq] |
GSE167254 |
Neuronal Enhancers are Hotspots for DNA Single-Strand Break Repair [END-seq] |
GSE167255 |
Neuronal Enhancers are Hotspots for DNA Single-Strand Break Repair [HiC] |
GSE167257 |
Neuronal Enhancers are Hotspots for DNA Single-Strand Break Repair [SAR-seq] |
GSE167258 |
Neuronal Enhancers are Hotspots for DNA Single-Strand Break Repair [SEAL] |
GSE167259 |
Neuronal Enhancers are Hotspots for DNA Single-Strand Break Repair |
GSE167368 |
Methods for Cardiac Fibroblast Generation from iPSCs: Updates and Characterization |
GSE167381 |
LKB1 inactivation initiates a chromatin remodeling cascade to drive metastatic progression |
GSE167409 |
A hidden layer of structural variation in transposable elements reveals potential genetic modifiers in human disease-risk loci |
GSE167607 |
Gene Regulation Dynamics during the Cell Cycle uncovered by RNA velocity and deep-learning (IMR90) |
GSE167609 |
Gene Regulation Dynamics during the Cell Cycle uncovered by RNA velocity and deep-learning |
GSE167869 |
BCOR and BCORL1 Mutations Drive Epigenetic Reprogramming and Oncogenic Signaling by Unlinking PRC1.1 from Target Genes |
GSE167934 |
Integrating transcription factor abundance with chromatin accessibility in human erythroid lineage commitment |
GSE168125 |
YAP1 nuclear efflux and transcriptional reprograming is triggered by membrane diminution upon VSV-G-induced cell fusion |
GSE168234 |
Learning cis-regulatory principles of ADAR-based RNA editing from CRISPR-mediated mutagenesis |
GSE168296 |
Functional impairment of HIV-specific CD8+ T cells precedes aborted control of viremia |
GSE168407 |
A follicular regulatory innate lymphoid cell population impairs interactions between germinal center Tfh and B cells |
GSE168408 |
Human prefrontal cortex gene regulatory dynamics from gestation to adulthood at single-cell resolution |
GSE168559 |
Lnc453774.1 mediated gene expression in human HK-2 cells |
GSE168714 |
Circulating miR-181 is a prognostic biomarker for amyotrophic lateral sclerosis |
GSE168782 |
RNA sequencing of wild-type and mutant KRAS human lung cancer cell lines with of without FASN inhibition. |
GSE168851 |
Spear-ATAC: Pooled, droplet-based, single-cell chromatin accessibility CRISPR screens |
GSE168977 |
Phosphorylation of Ribosomal Protein S6 differentially affects mRNA translation based on ORF length |
GSE169084 |
A human liver cell-based system modeling a clinical prognostic liver signature combined with single-cell RNA-Seq for discovery of liver disease therapeutics |
GSE169140 |
Poly (A) Click-seq for U937 control and PMA-treated (6h and 24h) cells |
GSE169310 |
H3K4me3 histone ChIPseq Analysis Reveals Molecular Mechanisms Responsible for Neutrophil dysfunction in HIV-infected individuals |
GSE169503 |
Identification and characterization of a SARS-CoV-2 specific CD8 T cell response with immunodominant features |
GSE171019 |
A disease-linked lncRNA mutation in RNase MRP inhibits ribosome synthesis [human] |
GSE171021 |
A disease-linked lncRNA mutation in RNase MRP inhibits ribosome synthesis |
GSE171098 |
TooManyPeaks identifies drug-resistant-specific regulatory elements from single-cell leukemic epigenomes [ChIP-seq] |
GSE171115 |
RNA-seq of METTL4-mediated Nuclear N6-Deoxyadenosine Methylation Promotes Metastasis through Activating Multiple Metastasis-inducing targets |
GSE171116 |
ChIP-seq of METTL4-mediated Nuclear N6-Deoxyadenosine Methylation Promotes Metastasis through Activating Multiple Metastasis-inducing targets |
GSE171132 |
Topoisomerase 1 activity during mitotic transcription favors the transition from mitosis to G1 [ChIP-seq] |
GSE171133 |
Topoisomerase 1 activity during mitotic transcription favors the transition from mitosis to G1 [SLAM-seq] |
GSE171134 |
Topoisomerase 1 activity during mitotic transcription favors the transition from mitosis to G1 |
GSE171526 |
4C analysis of MN1-ETV6 translocations |
GSE171545 |
Direct Immunodetection of Global A-to-I RNA Editing Activity with a Chemiluminescent Bioassay |
GSE171582 |
Intestinal stroma guides monocyte differentiation to macrophages through GM-CSF |
GSE171653 |
Bromocriptine reduces endometrial cell growth in women with adenomyosis by targeting glucose metabolism |
GSE171678 |
Systematic discovery and perturbation of regulatory genes in human T cells reveals the architecture of immune networks [Amplicon] |
GSE171692 |
Total RNA sequencing of FXN knockdown in pulmonary artery endothelial cells |
GSE171737 |
Systematic discovery and perturbation of regulatory genes in human T cells reveals the architecture of immune networks |
GSE171768 |
Single nucleus RNA sequence (snRNAseq) analysis of the spectrum of trophoblast lineages generated from human pluripotent stem cells in vitro |
GSE171792 |
APEX-seq Captures the Protein-RNA Interaction Patterns of DDX3X and DDX3Y |
GSE171803 |
DUX4 is a multifunctional factor priming human embryonic genome activation |
GSE171895 |
High-dimensional single cell analysis of T cells infiltrating human intrahepatic cholangiocarcinoma [RNA-Seq] |
GSE171899 |
High-dimensional single cell analysis of T cells infiltrating human intrahepatic cholangiocarcinoma [scRNA-Seq] |
GSE171900 |
Hyperactivated Tregs abundantly infiltrate human intrahepatic cholangiocarcinoma and are controlled by transcription factor MEOX1 |
GSE171962 |
Direct profiling of genome-wide dCas9 and Cas9 specificity using ssDNA mapping (CasKAS) |
GSE171988 |
Alternative splicing and gene expression defects in motorneurons derived from DM1 hiPSCs and MBNL knockouts hiPSCs generated by CRISPR/Cas9. |
GSE171992 |
Selective Activation of CNS and Reference PPARGC1A Promoters Is Associated with Distinct Gene Programs Relevant for Neurodegenerative Diseases |
GSE172019 |
ActD timecourse in HeLa cells, HeLa RNF219 KO cells, HeLa RNF219 KO cells overexpressing 3xFLAG-SBP-RNF219-WT or 3xFLAG-SBP-RNF219-mut |
GSE172043 |
Characterizing the invasive tumor front of aggressive uterine adenocarcinoma and leiomyosarcoma |
GSE172152 |
MOZ and Menin-MLL Complexes are Complementary Regulators of Chromatin Association and Transcriptional Output in Gastrointestinal Stromal Tumor [ChIP-seq and CUT&Tag] |
GSE172154 |
MOZ and Menin-MLL Complexes are Complementary Regulators of Chromatin Association and Transcriptional Output in Gastrointestinal Stromal Tumor |
GSE172361 |
Temporal and functional determinants of intra-hepatic vascular homeostatic specialization [human liver + HUVEC] |
GSE172362 |
Temporal and functional determinants of intra-hepatic vascular homeostatic specialization |
GSE172481 |
Profiling the human immune response to Plasmodium falciparum during the first three infections of life |
GSE172920 |
Single-cell multi-modal profiling of proteins and chromatin accessibility using PHAGE-ATAC [Spike_mix_pbmcs] |
GSE172921 |
Single-cell multi-modal profiling of proteins and chromatin accessibility using PHAGE-ATAC [Intracellular_GFP] |
GSE172923 |
Single-cell multi-modal profiling of proteins and chromatin accessibility using PHAGE-ATAC [ASAP_Phage_comparison] |
GSE173083 |
Combinatorial optimization of mRNA structure, stability, and translation for RNA-based therapeutics |
GSE173317 |
Blood transcriptomes of anti-SARS-CoV2 antibody positive healthy individuals with prior asymptomatic versus clinical infection |
... Accession list truncated, click here to browse through all related public accessions You can also download a list of all accessions here |